Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005099.1 Hibiscus syriacus cultivar Beakdansim tig00011465_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73246

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13495--13521
2
13.5
2
100
0
54
51
0
0
48
1.00
14507--14645
61
2.3
62
96
1
253
49
16
18
15
1.80
15868--15895
11
2.5
11
100
0
56
92
0
7
0
0.37
18398--18467
30
2.3
30
87
4
97
20
21
28
30
1.98
18418--18474
30
1.9
30
96
0
105
21
22
29
26
1.99
32521--32552
3
10.7
3
93
0
55
34
3
0
62
1.11
33801--33834
10
3.3
10
88
8
50
32
2
0
64
1.08
34159--34183
2
12.5
2
100
0
50
48
0
0
52
1.00
44122--44184
31
2.1
30
88
8
92
57
6
3
33
1.40
45069--45098
15
2.0
15
93
0
51
26
3
0
70
1.03
62580--62626
15
3.1
15
84
0
58
68
19
0
12
1.21
62595--62628
9
3.8
9
84
0
50
67
11
0
20
1.21
62589--62623
18
1.9
18
94
0
61
68
14
0
17
1.21
66689--66737
24
2.1
23
84
3
62
53
0
2
44
1.12
70326--70418
40
2.3
42
83
7
111
25
13
22
37
1.92
70545--70648
39
2.6
39
77
8
95
36
14
17
31
1.90

Tables:   1

The End!