Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000510.1 Hibiscus syriacus cultivar Beakdansim tig00000969_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80062

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--88
6
4.5
6
100
0
54
33
51
14
0
1.43
579--617
6
6.7
6
94
5
71
0
17
48
33
1.48
715--1021
20
14.8
20
83
12
288
17
17
26
38
1.92
753--1064
40
7.6
40
77
14
262
16
18
25
39
1.91
760--1027
42
6.5
41
80
14
284
16
18
26
38
1.92
825--1064
42
5.8
40
74
19
142
16
18
26
38
1.92
5220--5313
45
2.1
45
83
0
125
41
19
15
23
1.90
5278--6006
38
19.7
37
76
12
538
36
17
20
25
1.95
5537--5726
97
2.0
96
82
3
229
35
19
20
25
1.96
5499--5762
135
2.0
135
84
3
352
34
19
21
24
1.96
5476--5989
173
2.9
173
81
6
521
35
18
20
24
1.95
15820--15863
22
1.9
24
86
9
65
70
0
2
27
0.99
15839--15881
16
2.7
16
85
7
52
65
0
2
32
1.06
16558--16686
68
1.9
68
84
9
174
56
10
0
31
1.39
17559--17639
36
2.2
37
78
6
94
35
11
33
19
1.87
17750--17777
2
14.0
2
100
0
56
50
0
0
50
1.00
22209--22246
14
2.7
14
84
8
51
18
0
34
47
1.49
22825--22858
2
17.0
2
93
0
59
2
0
47
50
1.16
26641--26796
77
2.0
77
94
0
276
36
8
18
35
1.82
27895--27933
18
2.2
18
85
0
51
69
2
0
28
1.02
28057--28081
3
8.3
3
100
0
50
32
0
0
68
0.90
38087--38148
7
9.1
7
80
16
60
77
0
12
9
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38087--38155
25
2.8
24
80
10
79
76
0
13
10
1.01
38091--38155
17
3.8
18
84
13
84
76
0
13
9
1.00
38072--38170
32
3.0
32
81
15
105
76
1
13
9
1.06
39044--39353
136
2.3
136
91
0
503
34
18
21
26
1.96
39337--39404
16
3.7
18
74
20
61
48
13
19
19
1.81
45266--45319
2
27.0
2
100
0
108
50
0
0
50
1.00
45814--45872
28
2.1
28
93
6
102
38
25
1
33
1.66
47555--47586
3
10.7
3
100
0
64
34
0
0
65
0.93
49162--49238
29
2.7
29
75
15
79
22
7
7
62
1.48
51065--51093
14
2.1
14
100
0
58
48
6
0
44
1.29
57245--57272
2
14.0
2
100
0
56
50
0
0
50
1.00
60317--60565
75
3.4
75
84
4
344
39
13
14
32
1.85
66826--66875
20
2.5
20
90
0
82
50
20
8
22
1.74
70183--70639
150
3.0
148
86
6
607
39
10
12
37
1.77
70802--71043
118
2.1
115
84
3
306
30
16
12
40
1.85

Tables:   1

The End!