Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005108.1 Hibiscus syriacus cultivar Beakdansim tig00011481_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74155

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10946--10995
20
2.5
20
93
0
82
28
22
14
36
1.92
22174--22223
27
1.9
26
84
8
66
62
18
10
10
1.54
22481--22521
14
2.9
15
85
7
50
65
12
4
17
1.42
22562--22641
40
1.9
40
87
7
115
35
13
12
38
1.83
37450--37876
212
2.0
212
99
0
845
25
16
26
30
1.97
46844--46927
43
2.0
42
88
6
125
36
16
19
27
1.93
53821--53867
22
2.1
22
96
0
85
19
25
38
17
1.92
58346--58400
24
2.3
24
84
6
67
30
5
5
58
1.44
62527--62612
29
3.0
29
96
3
156
12
34
31
20
1.91
62671--62726
29
1.9
29
96
0
103
12
37
30
19
1.89
62730--62818
33
2.7
33
85
0
97
12
35
26
24
1.91
62767--62884
10
11.1
10
73
12
83
11
32
32
24
1.90
62759--62882
33
3.8
33
86
9
143
12
30
32
25
1.92
63172--63235
28
2.5
25
76
16
76
31
9
12
46
1.73
64044--64069
13
2.0
13
100
0
52
23
7
0
69
1.14
72236--72410
80
2.1
86
89
7
272
33
21
12
33
1.90

Tables:   1

The End!