Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005110.1 Hibiscus syriacus cultivar Beakdansim tig00011486_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64254

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--227
1
47.0
1
91
0
76
95
0
4
0
0.25
177--227
13
3.9
13
94
0
93
94
0
5
0
0.32
169--229
22
2.8
22
87
9
90
90
0
8
1
0.53
2407--2443
19
1.9
19
88
0
56
18
21
35
24
1.96
4809--5462
116
5.9
112
85
10
746
36
15
18
30
1.91
5382--5671
124
2.4
120
84
6
363
41
16
18
24
1.90
5810--5861
3
17.7
3
80
11
63
34
1
0
63
1.06
7222--7256
3
11.3
3
87
6
52
28
0
0
71
0.86
7224--7259
16
2.2
16
95
0
63
27
0
0
72
0.85
7257--7288
17
1.9
16
93
6
55
65
0
0
34
0.93
7528--7582
27
2.0
27
86
6
76
49
1
1
47
1.23
9911--10093
43
4.3
43
91
0
267
28
22
22
25
1.99
9911--10119
43
4.9
43
88
0
258
28
21
22
27
1.99
9930--10142
86
2.5
86
85
2
284
28
21
23
27
1.99
13727--13937
52
4.1
52
97
0
395
43
16
8
32
1.77
15091--15171
42
1.9
42
94
0
144
29
20
12
37
1.90
17608--17641
2
17.0
2
93
0
59
50
2
0
47
1.16
18207--18247
19
2.2
19
95
4
75
24
12
0
63
1.28
18699--18740
22
1.9
22
85
0
57
59
19
11
9
1.59
22383--22436
24
2.2
24
100
0
108
42
7
0
50
1.30
22555--22733
59
3.1
59
82
4
202
31
24
4
40
1.75
24190--24228
13
2.9
13
88
11
53
15
82
0
2
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30823--30858
17
2.1
17
89
0
54
47
0
0
52
1.00
35743--35774
3
11.0
3
93
6
57
0
31
0
68
0.90
47482--47549
3
23.0
3
79
8
77
36
0
1
61
1.05
56633--56855
114
2.0
114
90
0
356
33
14
20
31
1.93
58794--58948
54
2.9
54
92
0
256
38
15
23
23
1.93
59314--59412
22
4.5
22
93
0
171
33
12
12
42
1.79
60083--60794
76
9.5
76
94
3
1228
24
19
22
34
1.97
60083--60794
227
3.2
227
94
2
1224
24
19
22
34
1.97
60083--60794
302
2.4
300
93
3
1211
24
19
22
34
1.97
61949--61992
21
2.2
20
87
4
61
31
27
25
15
1.96

Tables:   1

The End!