Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005112.1 Hibiscus syriacus cultivar Beakdansim tig00011491_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41874

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144--178
16
2.2
16
89
0
52
31
25
14
28
1.95
4254--4315
11
5.7
11
82
14
76
59
0
0
40
0.97
4662--5138
115
4.2
112
75
14
374
29
19
14
36
1.91
5904--6349
115
3.9
114
93
2
724
30
20
14
34
1.93
6635--6683
16
2.8
17
78
12
55
46
6
10
36
1.63
7031--7094
10
6.5
10
83
1
76
1
12
3
82
0.85
14390--14421
15
2.1
15
94
0
55
46
9
18
25
1.79
17665--17743
36
2.3
34
78
8
86
64
3
3
27
1.28
17708--17765
28
2.2
26
84
6
71
60
1
5
32
1.29
20781--20822
21
2.1
21
87
12
63
73
2
0
23
0.94
22794--22823
2
15.5
2
93
6
53
0
50
0
50
1.00
23252--23278
2
13.5
2
100
0
54
51
0
0
48
1.00
26305--26353
19
2.5
19
83
3
62
18
6
4
71
1.23
40456--40513
25
2.3
25
100
0
116
31
36
15
17
1.91

Tables:   1

The End!