Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005115.1 Hibiscus syriacus cultivar Beakdansim tig00011502_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62827

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2713--3106
198
2.0
196
98
1
761
24
16
19
40
1.91
10530--10575
24
1.9
24
95
0
83
2
39
8
50
1.46
20391--20431
15
2.7
16
81
11
50
0
39
4
56
1.21
20395--20435
16
2.7
15
88
3
55
0
34
4
60
1.18
21383--21408
2
13.0
2
100
0
52
50
0
0
50
1.00
34640--34676
2
18.5
2
100
0
74
51
0
0
48
1.00
38264--38296
15
2.1
16
88
5
50
9
24
15
51
1.72
39046--39077
16
1.9
17
93
6
57
34
21
6
37
1.79
51386--51430
17
2.6
17
75
0
54
42
0
0
57
0.98
55977--56038
32
1.9
32
83
0
79
37
0
0
62
0.95

Tables:   1

The End!