Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005122.1 Hibiscus syriacus cultivar Beakdansim tig00011521_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57674

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6589--6657
2
36.5
2
84
11
92
49
0
1
49
1.09
6691--6779
41
2.2
41
85
4
126
51
0
1
47
1.08
9738--9798
23
2.7
23
86
0
77
29
24
22
22
1.99
9826--10039
103
2.1
103
93
0
365
36
24
13
25
1.91
17021--17084
18
3.6
18
79
8
67
21
23
14
40
1.90
21221--21276
24
2.4
24
87
3
78
8
8
25
57
1.58
21240--21328
24
3.7
24
77
4
81
11
12
19
57
1.64
22591--22653
34
2.0
33
84
12
87
19
1
14
65
1.35
22707--22762
23
2.4
24
81
6
69
25
7
14
53
1.66
24887--24926
17
2.4
17
86
0
53
65
0
2
32
1.06
43787--43836
20
2.5
20
93
0
82
28
22
14
36
1.92
53992--54036
22
2.1
21
83
4
54
35
6
4
53
1.47
54939--54988
27
1.9
26
84
8
66
62
18
10
10
1.54
55322--55401
39
2.0
39
85
7
106
33
15
12
38
1.84

Tables:   1

The End!