Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005124.1 Hibiscus syriacus cultivar Beakdansim tig00011523_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59304

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7603--7670
3
23.0
3
79
8
77
36
0
1
61
1.05
16780--17002
114
2.0
114
89
0
347
33
15
19
31
1.93
18953--19107
54
2.9
54
93
0
256
37
15
23
23
1.93
19474--19572
22
4.5
22
96
0
180
33
12
13
41
1.81
20246--20960
76
9.4
76
96
1
1299
23
20
21
34
1.97
20246--20960
153
4.7
152
96
0
1299
23
20
21
34
1.97
21091--21158
3
22.0
3
82
5
82
38
0
1
60
1.06
39478--39595
60
2.0
60
91
0
191
33
6
41
17
1.76
43712--43751
20
2.0
20
95
0
71
45
7
5
42
1.54
44917--45016
33
3.0
33
92
0
164
46
15
7
32
1.72
54139--54181
21
2.0
21
86
0
59
25
11
30
32
1.91

Tables:   1

The End!