Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005127.1 Hibiscus syriacus cultivar Beakdansim tig00011537_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84837

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5324--5378
19
2.8
19
76
17
60
49
0
0
50
1.00
5887--5912
2
13.0
2
100
0
52
50
0
0
50
1.00
8714--8749
2
18.0
2
100
0
72
50
0
0
50
1.00
9508--9542
12
2.8
13
86
8
54
40
0
0
60
0.97
10457--10548
5
18.8
5
88
3
125
40
16
0
43
1.48
26332--26363
15
2.1
16
94
5
57
59
0
0
40
0.97
26671--26703
16
2.1
15
94
5
57
33
0
0
66
0.92
28946--29010
19
3.4
19
74
19
71
36
4
9
49
1.56
28952--29022
22
3.5
22
74
18
80
40
5
11
42
1.64
28942--29022
39
2.1
39
97
0
153
40
6
9
43
1.63
28942--29000
17
3.2
17
74
21
64
42
6
8
42
1.61
53523--53557
18
2.0
17
88
5
52
48
20
5
25
1.71
55802--55954
31
5.0
31
95
2
265
37
22
19
19
1.94
57160--57185
12
2.2
12
100
0
52
30
0
0
69
0.89
60166--60319
31
5.0
31
96
1
274
38
22
19
19
1.94
65135--65201
22
3.0
22
95
2
116
25
28
26
19
1.99
66891--66935
21
2.1
21
87
0
63
15
24
28
31
1.96
70075--70163
22
4.0
22
97
1
160
25
28
26
19
1.99
70089--70151
10
5.5
13
65
27
52
26
26
26
19
1.99
71846--71890
21
2.1
21
87
0
63
15
24
28
31
1.96

Tables:   1

The End!