Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005128.1 Hibiscus syriacus cultivar Beakdansim tig00011544_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60675

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15492--15532
16
2.6
16
88
3
57
39
19
4
36
1.73
15778--15906
24
5.5
23
83
4
123
57
17
12
12
1.65
15778--15911
47
2.8
47
81
1
133
57
17
11
13
1.65
16081--16124
14
3.4
14
70
23
51
56
18
11
13
1.66
22023--22102
25
2.9
28
81
16
103
58
1
12
27
1.42
22253--22280
2
14.0
2
100
0
56
50
0
0
50
1.00
30067--30123
22
2.6
22
80
0
69
35
5
7
52
1.51
34845--34870
12
2.2
12
100
0
52
30
0
0
69
0.89
34822--34904
42
2.0
41
86
6
114
33
2
1
62
1.16
34844--34908
21
3.2
20
72
14
60
32
3
0
64
1.09
39126--39325
100
2.0
100
100
0
400
22
19
27
32
1.97
43021--43357
6
56.5
6
96
1
633
17
0
32
49
1.47
46695--46910
33
6.5
33
73
13
109
41
32
19
6
1.77
46790--46910
3
40.3
3
89
0
89
45
34
19
0
1.51
46784--46899
36
3.2
36
93
0
187
49
33
17
0
1.47
54961--55011
23
2.2
24
78
7
59
58
11
19
9
1.60
54973--55027
23
2.5
23
88
5
78
58
16
18
7
1.60
57886--57939
27
2.0
27
92
0
90
44
0
3
51
1.19
58730--58819
47
1.9
46
86
10
130
23
34
12
30
1.91

Tables:   1

The End!