Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000513.1 Hibiscus syriacus cultivar Beakdansim tig00000977_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76154

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
200--376
49
3.5
49
79
8
169
45
14
15
24
1.83
202--357
54
3.0
54
82
7
180
46
14
15
24
1.83
200--393
103
1.9
103
83
4
257
43
13
15
26
1.85
1386--3023
827
2.0
826
97
1
3124
35
17
17
30
1.92
6872--6898
2
13.5
2
100
0
54
51
0
0
48
1.00
13571--13615
16
2.8
16
96
0
81
6
35
8
48
1.61
16318--16350
2
16.5
2
100
0
66
48
0
0
51
1.00
19562--19610
20
2.5
20
79
0
62
38
16
14
30
1.88
19641--19710
35
2.0
35
88
5
106
27
18
31
22
1.97
20811--20866
23
2.4
23
88
5
78
39
0
21
39
1.54
24236--24294
3
19.7
3
100
0
118
67
0
0
32
0.91
24301--24415
23
5.2
22
74
15
89
74
4
6
14
1.16
24302--24382
20
3.8
20
77
12
74
72
4
7
14
1.23
24318--24393
14
5.4
14
66
16
50
73
3
5
17
1.17
24351--24415
30
2.2
28
86
8
85
76
3
6
13
1.09
24351--24450
29
3.4
30
79
8
89
73
2
9
16
1.18
24477--24512
16
2.2
16
95
0
63
77
2
5
13
1.05
24541--24579
5
7.6
5
83
16
53
82
0
0
17
0.68
24533--24581
21
2.4
21
90
6
75
79
0
2
18
0.83
25072--25120
22
2.1
24
81
11
57
4
2
34
59
1.28
26658--26708
20
2.5
20
96
0
93
21
25
33
19
1.97
41037--41090
20
2.8
20
91
2
92
37
14
31
16
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47609--47670
23
2.9
21
85
7
81
20
35
25
17
1.95
47652--47691
21
1.9
21
89
0
62
25
40
25
10
1.86
49618--49669
9
6.4
8
75
20
54
13
0
26
59
1.34
49621--49664
17
2.6
17
85
7
63
13
0
29
56
1.38
51617--51725
53
2.1
53
92
0
182
23
17
19
39
1.92
53078--53112
18
1.9
18
88
0
52
25
8
40
25
1.84
54737--54792
24
2.2
26
78
18
73
58
7
1
32
1.35
54745--54792
23
2.0
26
88
12
75
62
8
0
29
1.24
55585--55613
7
4.1
7
100
0
58
13
31
0
55
1.39
56010--56036
2
13.5
2
100
0
54
51
0
0
48
1.00
73565--73601
16
2.4
15
86
8
56
21
10
5
62
1.48
75530--75576
13
3.7
13
86
11
62
31
19
14
34
1.92
75530--75583
13
4.2
13
83
4
56
29
20
14
35
1.93
75734--75787
2
27.0
2
96
0
99
48
1
0
50
1.11

Tables:   1

The End!