Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005132.1 Hibiscus syriacus cultivar Beakdansim tig00011554_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73565

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3382--3466
11
7.2
11
72
22
66
31
36
3
28
1.74
3380--3483
36
2.9
36
95
1
183
30
36
3
28
1.75
9184--9245
27
2.2
28
78
13
74
8
17
14
59
1.58
14877--14997
17
7.1
17
72
10
77
38
11
8
41
1.71
16542--16610
33
2.1
33
83
5
86
30
36
1
31
1.67
20977--21090
37
3.2
36
90
3
167
32
35
3
28
1.74
21013--21074
13
5.0
12
74
18
56
30
35
3
30
1.74
21061--21129
33
2.1
33
83
5
86
30
36
1
31
1.67
24289--24333
22
2.1
21
84
12
56
44
35
2
17
1.62
24657--24699
17
2.6
17
82
14
54
79
2
16
2
0.95
24657--24699
16
2.6
17
89
10
63
79
2
16
2
0.95
35057--35125
33
2.1
33
83
5
86
31
1
36
30
1.67
35111--35207
13
8.0
12
72
22
62
28
3
37
30
1.73
35096--35208
36
3.2
36
92
1
174
27
3
36
32
1.74
37367--37409
15
2.8
15
80
16
52
2
16
2
79
0.95
37815--37883
33
2.1
33
83
5
86
31
1
36
30
1.67
37869--37965
13
8.0
12
72
22
62
28
3
37
30
1.73
37854--37966
36
3.2
36
92
1
174
27
3
36
32
1.74
44942--45033
45
2.0
45
81
4
105
25
14
23
36
1.92
47834--47901
21
3.2
21
79
4
64
77
11
10
0
0.98
47832--47883
22
2.4
22
86
0
68
82
9
7
0
0.84
47841--47875
13
2.6
13
95
4
61
80
8
11
0
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54269--54494
117
1.9
117
99
0
443
25
16
29
28
1.97

Tables:   1

The End!