Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005136.1 Hibiscus syriacus cultivar Beakdansim tig00011560_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52697

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2005--2033
13
2.2
13
100
0
58
51
0
13
34
1.42
10128--10171
2
22.0
2
100
0
88
50
0
0
50
1.00
14849--14901
20
2.7
20
87
0
79
11
49
26
13
1.75
15650--15719
3
23.7
3
88
8
72
60
0
0
40
0.97
15637--15719
39
2.1
39
84
4
105
57
0
0
42
0.98
15940--16804
113
7.6
113
92
2
1457
29
18
14
38
1.90
15940--16842
340
2.7
339
94
1
1610
29
18
14
38
1.90
16522--16566
23
1.9
23
82
13
56
15
26
6
51
1.68
15957--16804
453
1.9
452
94
2
1488
28
18
13
38
1.90
17242--17296
22
2.5
22
84
0
74
36
12
14
36
1.84
17683--17791
40
2.4
48
68
28
108
27
21
16
34
1.94
17699--17778
40
2.0
40
95
0
142
31
20
15
33
1.93
19904--20130
115
2.0
114
90
2
357
30
20
14
33
1.93
22280--22333
17
3.2
16
79
10
63
3
20
0
75
0.95
23268--23305
19
2.1
18
85
14
51
10
0
26
63
1.27
25914--25956
14
3.1
14
75
0
50
55
2
13
27
1.51
27513--27565
14
3.9
13
82
7
61
75
0
1
22
0.90
27514--27564
13
3.6
14
84
7
59
76
0
1
21
0.88
33255--33367
35
3.2
35
83
2
145
38
0
20
40
1.59
34808--34946
21
6.8
21
74
14
137
30
15
10
43
1.81
34807--34967
81
2.0
81
97
0
304
27
16
11
43
1.83
35137--35193
27
2.1
27
80
6
62
56
5
17
21
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45020--45044
13
1.9
13
100
0
50
72
4
0
24
1.02
45779--45816
2
20.0
2
89
10
62
52
0
0
47
1.00
47872--47899
12
2.3
12
100
0
56
78
0
0
21
0.75
49914--49946
10
3.0
11
83
16
50
69
0
0
30
0.88

Tables:   1

The End!