Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000514.1 Hibiscus syriacus cultivar Beakdansim tig00000980_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55613

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1499--1547
25
2.0
26
88
8
75
36
6
0
57
1.24
4102--4282
83
2.2
83
87
3
251
34
28
16
20
1.94
5775--5849
28
2.5
30
82
6
91
30
18
4
46
1.67
6572--6613
21
2.0
21
85
4
57
26
2
2
69
1.13
7013--7101
23
3.7
23
82
8
106
49
3
1
46
1.26
7329--7378
24
2.2
23
86
10
68
46
4
2
48
1.32
16171--16211
20
2.0
20
85
4
55
24
21
24
29
1.99
21944--22164
44
5.0
44
93
1
354
24
21
13
41
1.88
22203--22250
4
12.0
4
100
0
96
25
25
0
50
1.50
25512--25563
19
2.8
19
94
2
88
25
21
7
46
1.77
28832--29134
44
6.9
42
82
6
311
26
20
9
43
1.81
28833--29134
88
3.4
88
88
2
410
26
20
9
44
1.81
38278--38433
31
5.0
31
96
1
269
37
23
19
19
1.94
42813--42968
31
5.0
31
92
1
251
38
22
18
20
1.93
47279--47308
11
2.6
12
94
5
53
6
16
0
76
0.99
48363--48411
24
2.0
25
84
4
64
24
10
14
51
1.73
51676--51711
17
2.1
17
89
0
54
69
2
2
25
1.15
51686--51795
52
2.1
51
91
1
175
48
11
3
36
1.58
55422--55607
32
5.6
33
77
18
158
45
4
9
40
1.55
55405--55611
102
2.0
101
81
13
237
45
4
9
40
1.57
55587--55613
12
2.2
12
100
0
54
44
7
7
40
1.60

Tables:   1

The End!