Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005143.1 Hibiscus syriacus cultivar Beakdansim tig00011582_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63102

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3783--3831
23
2.1
23
92
0
80
10
14
18
57
1.65
3781--3836
23
2.3
23
84
6
76
8
12
16
62
1.53
9214--9382
93
1.8
93
94
0
302
10
16
11
61
1.56
11133--11179
5
9.6
5
86
9
53
80
0
19
0
0.70
15389--15416
14
2.0
14
100
0
56
21
42
0
35
1.53
15791--15826
18
2.0
18
89
10
56
77
0
22
0
0.76
15798--15827
13
2.2
14
94
5
53
80
0
20
0
0.72
15851--15907
25
2.2
26
93
3
98
77
0
21
1
0.86
15857--15893
16
2.4
16
90
4
58
81
0
18
0
0.70
15857--15907
15
3.7
14
75
20
54
78
0
21
0
0.75
20165--20196
13
2.4
14
94
5
57
78
0
18
3
0.89
20221--20255
11
3.3
11
84
8
54
82
0
17
0
0.66
35076--35103
14
2.0
14
100
0
56
21
42
0
35
1.53
35724--35762
16
2.4
16
86
0
51
15
20
0
64
1.30
42495--42529
18
1.9
18
88
11
54
80
2
17
0
0.84
47938--47965
14
2.0
14
100
0
56
35
0
42
21
1.53
48305--48355
19
2.6
20
87
3
68
45
5
15
33
1.71
51132--51189
15
3.6
16
77
11
57
63
0
20
15
1.30
51393--51432
21
1.9
21
89
0
62
0
27
0
72
0.85
51616--51661
20
2.3
21
81
11
60
52
0
21
26
1.47
60551--61239
344
2.0
343
93
3
1172
33
19
16
31
1.94
62967--63007
12
3.3
12
82
3
55
2
14
0
82
0.76

Tables:   1

The End!