Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005144.1 Hibiscus syriacus cultivar Beakdansim tig00011585_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71898

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4973--5059
2
43.5
2
97
0
165
1
50
0
48
1.08
7793--7834
18
2.4
18
84
4
59
59
0
0
40
0.97
14507--14547
21
1.9
22
90
5
66
19
0
12
68
1.21
17802--17855
14
3.9
13
76
11
54
62
1
1
33
1.16
19155--19211
3
19.0
3
86
13
82
70
0
0
29
0.88
19156--19224
34
2.1
34
84
7
90
72
2
0
24
0.98
19378--19710
118
2.8
119
92
0
560
28
17
13
40
1.88
19778--20225
123
3.7
122
90
2
650
25
19
13
40
1.89
20612--20674
22
2.9
22
90
0
90
36
14
12
36
1.84
21621--21658
18
2.1
18
95
0
67
55
5
5
34
1.45
33553--33586
2
17.5
2
93
6
61
50
0
0
50
1.00
33729--33768
13
3.0
13
85
7
53
62
2
2
32
1.22
35006--35037
15
2.1
15
100
0
64
81
0
0
18
0.70
35003--35038
18
2.1
17
94
5
63
80
0
0
19
0.71
34999--35034
12
3.0
12
87
0
54
75
0
0
25
0.81
38343--38408
27
2.5
27
95
2
116
22
28
13
34
1.92
49143--49173
15
2.1
15
93
0
53
41
3
25
29
1.71
49625--49657
12
2.6
13
90
4
50
51
0
0
48
1.00
63535--63656
45
2.7
46
85
5
167
30
12
19
37
1.89

Tables:   1

The End!