Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005145.1 Hibiscus syriacus cultivar Beakdansim tig00011587_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52801

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1154--1378
117
1.9
116
98
0
432
25
16
29
28
1.97
21999--22072
36
2.2
33
80
11
78
14
22
0
62
1.32
30227--30272
22
2.3
19
85
11
56
0
8
10
80
0.91
30227--30272
20
2.2
20
88
7
65
0
8
10
80
0.91
33288--33329
22
2.0
21
85
4
57
33
19
4
42
1.72
33611--33635
11
2.3
11
100
0
50
16
36
8
40
1.77
36868--36924
19
2.8
20
80
15
64
77
5
15
1
1.03
43076--43114
20
2.0
20
85
5
53
33
10
2
53
1.48
43903--43945
20
2.2
20
87
4
61
34
9
6
48
1.62
46135--46163
5
6.0
5
92
8
51
79
0
20
0
0.74
50735--50864
64
2.0
65
89
1
199
22
24
25
27
2.00

Tables:   1

The End!