Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005148.1 Hibiscus syriacus cultivar Beakdansim tig00011594_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87556

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3851--3973
40
3.1
40
97
0
237
20
21
22
34
1.96
5232--5275
23
1.9
23
86
9
63
43
2
0
54
1.12
19317--19348
13
2.5
13
94
0
55
6
6
31
56
1.49
20834--20906
23
3.1
22
69
23
60
28
12
15
43
1.82
33397--33423
2
13.5
2
100
0
54
48
0
51
0
1.00
39442--39472
15
2.1
15
93
0
53
45
0
0
54
0.99
48945--48986
21
2.0
21
100
0
84
33
14
4
47
1.65
48973--49083
33
3.4
32
90
3
161
32
8
14
45
1.74
49125--49181
15
3.6
15
75
13
60
33
12
12
42
1.80
57264--57324
30
2.1
30
90
3
97
47
8
3
40
1.49
58400--58424
2
12.5
2
100
0
50
52
0
0
48
1.00
65710--65957
55
4.6
56
79
7
208
30
24
15
29
1.96
65872--66228
51
7.0
51
97
0
642
26
28
15
29
1.96
65829--66227
102
3.9
102
94
1
663
28
27
15
28
1.96
67481--67582
18
5.8
18
79
7
95
5
20
0
72
1.11
67468--67516
24
2.0
26
88
8
75
8
20
0
71
1.11
67499--67553
25
2.2
25
83
3
65
3
20
1
74
1.06
77249--77345
44
2.2
45
88
3
142
38
20
12
28
1.89
86910--86958
19
2.6
19
80
9
64
18
18
0
63
1.32

Tables:   1

The End!