Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005154.1 Hibiscus syriacus cultivar Beakdansim tig00011623_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47365

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9861--9898
11
3.5
11
89
7
60
31
7
2
57
1.41
11102--11221
43
2.8
42
71
10
109
27
17
6
48
1.72
12723--12769
17
3.1
17
66
33
52
57
4
8
29
1.48
21451--21492
19
2.1
21
82
8
52
54
9
4
30
1.53
24412--24458
20
2.3
20
85
3
58
27
27
17
27
1.97
26170--26241
20
3.5
20
74
18
69
31
15
27
25
1.95
26018--26241
96
2.3
95
85
3
290
36
16
22
25
1.94
26576--27174
57
10.5
57
89
0
896
37
10
18
33
1.85
27610--27748
68
2.0
68
80
2
154
32
14
25
28
1.94
27908--28020
45
2.5
45
89
0
163
47
7
21
23
1.76
31549--31583
18
2.0
18
88
5
54
28
17
37
17
1.92
31667--31726
20
2.8
22
77
7
70
30
13
28
28
1.94
32063--32603
57
9.5
57
87
2
764
35
10
19
34
1.87
33257--33371
45
2.6
45
87
2
169
46
6
23
24
1.75
35165--35222
29
2.0
30
83
10
75
32
25
8
32
1.86
37515--37708
95
2.0
95
81
5
223
31
15
22
29
1.95
38142--38463
45
7.2
45
87
1
405
40
9
19
30
1.84
38142--38452
134
2.3
135
88
1
446
39
9
19
31
1.84
41770--41811
11
3.5
12
81
12
50
52
2
38
7
1.42

Tables:   1

The End!