Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01005158.1 Hibiscus syriacus cultivar Beakdansim tig00011629_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 51913
ACGTcount: A:0.33, C:0.17, G:0.16, T:0.33
Found at i:319 original size:26 final size:26
Alignment explanation
Indices: 290--349 Score: 102
Period size: 26 Copynumber: 2.3 Consensus size: 26
280 CGACTCGCCT
*
290 TAGCTTGCTAGCTTATCTCGGACACC
1 TAGCTTGCTAGCTTATCTCAGACACC
*
316 TAGCTTGCTAGCTTCTCTCAGACACC
1 TAGCTTGCTAGCTTATCTCAGACACC
342 TAGCTTGC
1 TAGCTTGC
350 CACTCCTTGG
Statistics
Matches: 32, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 32 1.00
ACGTcount: A:0.18, C:0.32, G:0.18, T:0.32
Consensus pattern (26 bp):
TAGCTTGCTAGCTTATCTCAGACACC
Found at i:11377 original size:20 final size:20
Alignment explanation
Indices: 11341--11386 Score: 60
Period size: 20 Copynumber: 2.4 Consensus size: 20
11331 CAAAATAATC
*
11341 CAATTTCACATTCAAAC-TT
1 CAATTTCACACTCAAACATT
11360 CAATTTCAACACTCAAACATT
1 CAATTTC-ACACTCAAACATT
11381 -AATTTC
1 CAATTTC
11387 CAGCATAGTA
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
19 7 0.29
20 15 0.62
21 2 0.08
ACGTcount: A:0.39, C:0.26, G:0.00, T:0.35
Consensus pattern (20 bp):
CAATTTCACACTCAAACATT
Found at i:15846 original size:13 final size:13
Alignment explanation
Indices: 15828--15855 Score: 56
Period size: 13 Copynumber: 2.2 Consensus size: 13
15818 ATCTATTTTT
15828 TGCAAGACCTGCA
1 TGCAAGACCTGCA
15841 TGCAAGACCTGCA
1 TGCAAGACCTGCA
15854 TG
1 TG
15856 ACGAATTATT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 15 1.00
ACGTcount: A:0.29, C:0.29, G:0.25, T:0.18
Consensus pattern (13 bp):
TGCAAGACCTGCA
Found at i:17559 original size:92 final size:92
Alignment explanation
Indices: 17403--17668 Score: 480
Period size: 92 Copynumber: 2.9 Consensus size: 92
17393 CAAATACTGA
17403 ATTTGAAACCGATAAT-CTAACTCTTTTGATATTTTGGGCCAAATTAATAGGCTAAGGTAACTAC
1 ATTTGAAACCGATAATGCTAACTCTTTTGATATTTTGGGCCAAATTAATAGGCTAAGGTAACTAC
17467 TTCACTTATAGCCCAATGTTGTATAGC
66 TTCACTTATAGCCCAATGTTGTATAGC
17494 ATTTGAAACCGATAATGCTAACTCTTTTGATATTTTGGGCCAAATTAATAGGCTAAGGTAACTAC
1 ATTTGAAACCGATAATGCTAACTCTTTTGATATTTTGGGCCAAATTAATAGGCTAAGGTAACTAC
*
17559 TTCACTTATAGCCCAATGTTGTATAGT
66 TTCACTTATAGCCCAATGTTGTATAGC
* * * *
17586 ATTTGAAACCGATAATGCTAACTCTTTTTATATTTTGGGCCTAATTAATATGCTAAAGTAACTAC
1 ATTTGAAACCGATAATGCTAACTCTTTTGATATTTTGGGCCAAATTAATAGGCTAAGGTAACTAC
17651 TTCACTTATAGCCCAATG
66 TTCACTTATAGCCCAATG
17669 CTATTGACTA
Statistics
Matches: 169, Mismatches: 5, Indels: 1
0.97 0.03 0.01
Matches are distributed among these distances:
91 16 0.09
92 153 0.91
ACGTcount: A:0.32, C:0.17, G:0.15, T:0.36
Consensus pattern (92 bp):
ATTTGAAACCGATAATGCTAACTCTTTTGATATTTTGGGCCAAATTAATAGGCTAAGGTAACTAC
TTCACTTATAGCCCAATGTTGTATAGC
Found at i:26661 original size:15 final size:16
Alignment explanation
Indices: 26643--26677 Score: 54
Period size: 15 Copynumber: 2.2 Consensus size: 16
26633 AATTTTTAAA
26643 TCAAAAATTTC-TTTT
1 TCAAAAATTTCATTTT
*
26658 TCAAAATTTTCATTTT
1 TCAAAAATTTCATTTT
26674 TCAA
1 TCAA
26678 TTTTGAAAGC
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
15 10 0.56
16 8 0.44
ACGTcount: A:0.34, C:0.14, G:0.00, T:0.51
Consensus pattern (16 bp):
TCAAAAATTTCATTTT
Found at i:28670 original size:21 final size:21
Alignment explanation
Indices: 28624--28703 Score: 81
Period size: 21 Copynumber: 3.8 Consensus size: 21
28614 TTCTTTAAGG
*
28624 GAAGGGATCGATCTTTTTCAT
1 GAAGGGATCGATCCTTTTCAT
* **
28645 AAAGGGATCGATCCTTTTGGT
1 GAAGGGATCGATCCTTTTCAT
* *
28666 GAAGGGATTGATCCTTTTCCT
1 GAAGGGATCGATCCTTTTCAT
*
28687 CGAA-GTATCGATCCTTT
1 -GAAGGGATCGATCCTTT
28704 ATGTAAAGGG
Statistics
Matches: 48, Mismatches: 10, Indels: 2
0.80 0.17 0.03
Matches are distributed among these distances:
21 45 0.94
22 3 0.06
ACGTcount: A:0.23, C:0.17, G:0.24, T:0.36
Consensus pattern (21 bp):
GAAGGGATCGATCCTTTTCAT
Found at i:29160 original size:35 final size:36
Alignment explanation
Indices: 29109--29195 Score: 122
Period size: 35 Copynumber: 2.4 Consensus size: 36
29099 ATATAGATGC
* **
29109 AAAACGACATCGTTTTGGTAAATTTTTATT-TTATT
1 AAAACGACATCATTTTGGTAAAAGTTTATTGTTATT
*
29144 AAAACGACATCATTTTGGTAAAAGTTTATTGTTTTT
1 AAAACGACATCATTTTGGTAAAAGTTTATTGTTATT
*
29180 AAAACGACATCTTTTT
1 AAAACGACATCATTTT
29196 TAATGCTATT
Statistics
Matches: 46, Mismatches: 5, Indels: 1
0.88 0.10 0.02
Matches are distributed among these distances:
35 27 0.59
36 19 0.41
ACGTcount: A:0.33, C:0.10, G:0.11, T:0.45
Consensus pattern (36 bp):
AAAACGACATCATTTTGGTAAAAGTTTATTGTTATT
Found at i:29309 original size:29 final size:29
Alignment explanation
Indices: 29277--29339 Score: 108
Period size: 29 Copynumber: 2.2 Consensus size: 29
29267 CCAATGTATT
29277 AAGTTTAGTTAGAAAATTAAAAACTTTTA
1 AAGTTTAGTTAGAAAATTAAAAACTTTTA
* *
29306 AAGTTTAGTTAGGAAATTGAAAACTTTTA
1 AAGTTTAGTTAGAAAATTAAAAACTTTTA
29335 AAGTT
1 AAGTT
29340 CAACGAGCAA
Statistics
Matches: 32, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
29 32 1.00
ACGTcount: A:0.44, C:0.03, G:0.14, T:0.38
Consensus pattern (29 bp):
AAGTTTAGTTAGAAAATTAAAAACTTTTA
Found at i:30004 original size:35 final size:35
Alignment explanation
Indices: 29939--30012 Score: 87
Period size: 35 Copynumber: 2.1 Consensus size: 35
29929 TGTCACGAAT
* * *
29939 AGTAAGGCCCTCAGTACAAATGTGAGGAGCCTCCA
1 AGTAAGGCCCTCAGCACAAATGCGAAGAGCCTCCA
* *
29974 AGTAAGGCCCTGAGCACAAA-GCCGAAGAGCCTCCG
1 AGTAAGGCCCTCAGCACAAATG-CGAAGAGCCTCCA
30009 AGTA
1 AGTA
30013 TTCTTCCTCC
Statistics
Matches: 33, Mismatches: 5, Indels: 2
0.82 0.12 0.05
Matches are distributed among these distances:
34 1 0.03
35 32 0.97
ACGTcount: A:0.32, C:0.27, G:0.27, T:0.14
Consensus pattern (35 bp):
AGTAAGGCCCTCAGCACAAATGCGAAGAGCCTCCA
Found at i:30155 original size:23 final size:24
Alignment explanation
Indices: 30090--30171 Score: 112
Period size: 24 Copynumber: 3.5 Consensus size: 24
30080 CATAATTCAT
* *
30090 GTCAAGTATCAGATCAGAATCCAG
1 GTCATGTATCAGATCAGAATCTAG
* *
30114 GTCATGTATCATATCAGAATCTAT
1 GTCATGTATCAGATCAGAATCTAG
*
30138 GTCA-GTATCAGATAAGAATCTAG
1 GTCATGTATCAGATCAGAATCTAG
30161 GTCATGTATCA
1 GTCATGTATCA
30172 TAACAAAATT
Statistics
Matches: 50, Mismatches: 7, Indels: 2
0.85 0.12 0.03
Matches are distributed among these distances:
23 20 0.40
24 30 0.60
ACGTcount: A:0.35, C:0.17, G:0.18, T:0.29
Consensus pattern (24 bp):
GTCATGTATCAGATCAGAATCTAG
Found at i:34216 original size:130 final size:130
Alignment explanation
Indices: 34075--34322 Score: 424
Period size: 130 Copynumber: 1.9 Consensus size: 130
34065 TATTTATATA
*
34075 ATCAATTTGGTCCTAAATTAAATAAAATTTAATAAATTAATCATTTAATTAGGATCTGACATGTG
1 ATCAATTTGGTCCTAAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTG
* * *
34140 TTAGCACATGATCATGACACGTGTCATTGGTGACACGTGTTACCGCCTAATTATTTATATATGCT
66 TTAACACATGATCATGACACGTGTCATTGGTGACACATGTCACCGCCTAATTATTTATATATGCT
34205 ATCAATTTGGTCCTAAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTG
1 ATCAATTTGGTCCTAAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTG
* * * *
34270 TTAACACATGATCATGATATGTGTTATTGGTGACACATGTCACCTCCTAATTA
66 TTAACACATGATCATGACACGTGTCATTGGTGACACATGTCACCGCCTAATTA
34323 GAAGAAAATT
Statistics
Matches: 110, Mismatches: 8, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
130 110 1.00
ACGTcount: A:0.35, C:0.15, G:0.14, T:0.37
Consensus pattern (130 bp):
ATCAATTTGGTCCTAAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTG
TTAACACATGATCATGACACGTGTCATTGGTGACACATGTCACCGCCTAATTATTTATATATGCT
Found at i:34353 original size:130 final size:129
Alignment explanation
Indices: 34089--34353 Score: 309
Period size: 130 Copynumber: 2.0 Consensus size: 129
34079 ATTTGGTCCT
* *
34089 AAATTAAATAAAATTTAATAAATTAATCATTTAATTAGGATCTGACATGTGTTAGCACATGATCA
1 AAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTGTTAACACATGATCA
* * *** * * **** *
34154 TGACACGTGTCATTGGTGACACGTGTTACCGCCTAATTATTTATATATGCTATCAATTTGGTCCT
66 TGACACGTGTCATTGGTGACACATGTCACCGCCTAATTAAGAAAATAAGCTATCAAAGAAGT-CA
34219 AAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTGTTAACACATGATCA
1 AAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTGTTAACACATGATCA
* * * * *
34284 TGATATGTGTTATTGGTGACACATGTCACCTCCTAATTAGAAGAAAATTAAGTTA-CAAAGAAGT
66 TGACACGTGTCATTGGTGACACATGTCACCGCCTAATT--AAGAAAA-TAAGCTATCAAAGAAGT
34348 -A
128 CA
34349 AAATT
1 AAATT
34354 TGGGTCTTGG
Statistics
Matches: 113, Mismatches: 19, Indels: 6
0.82 0.14 0.04
Matches are distributed among these distances:
130 100 0.88
132 8 0.07
133 5 0.04
ACGTcount: A:0.38, C:0.13, G:0.14, T:0.35
Consensus pattern (129 bp):
AAATTAAATAAAATTTAATAAATTAATCATTTAATCAGGATCTGACATGTGTTAACACATGATCA
TGACACGTGTCATTGGTGACACATGTCACCGCCTAATTAAGAAAATAAGCTATCAAAGAAGTCA
Found at i:34678 original size:28 final size:26
Alignment explanation
Indices: 34647--34707 Score: 68
Period size: 26 Copynumber: 2.3 Consensus size: 26
34637 AGTTGATACA
*
34647 ATATTTTAAAAGAATAAATTTAAGATTT
1 ATATTTT-AAA-AATAAATTTAAGAATT
* * *
34675 ATATTTTTAAACTAAATTTAATAATT
1 ATATTTTAAAAATAAATTTAAGAATT
34701 ATATTTT
1 ATATTTT
34708 TCATATTTAT
Statistics
Matches: 29, Mismatches: 4, Indels: 2
0.83 0.11 0.06
Matches are distributed among these distances:
26 20 0.69
27 2 0.07
28 7 0.24
ACGTcount: A:0.46, C:0.02, G:0.03, T:0.49
Consensus pattern (26 bp):
ATATTTTAAAAATAAATTTAAGAATT
Found at i:34806 original size:16 final size:18
Alignment explanation
Indices: 34785--34818 Score: 54
Period size: 16 Copynumber: 2.0 Consensus size: 18
34775 ATTTCTTATT
34785 AAAAATA-AAAT-ATTCA
1 AAAAATATAAATGATTCA
34801 AAAAATATAAATGATTCA
1 AAAAATATAAATGATTCA
34819 TACATTAATA
Statistics
Matches: 16, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
16 7 0.44
17 4 0.25
18 5 0.31
ACGTcount: A:0.65, C:0.06, G:0.03, T:0.26
Consensus pattern (18 bp):
AAAAATATAAATGATTCA
Found at i:34972 original size:35 final size:35
Alignment explanation
Indices: 34933--35009 Score: 100
Period size: 35 Copynumber: 2.2 Consensus size: 35
34923 ATATTACCTT
* *
34933 AAATTGAAGTATTTTAGAATTTAGGGTTTAGAATA
1 AAATTGAAGTACTTTAGAAATTAGGGTTTAGAATA
* * * *
34968 AAATTGAATTACTTTGGAAATTGGGGTTTAGAATG
1 AAATTGAAGTACTTTAGAAATTAGGGTTTAGAATA
35003 AAATTGA
1 AAATTGA
35010 TGACTGTTTT
Statistics
Matches: 36, Mismatches: 6, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
35 36 1.00
ACGTcount: A:0.39, C:0.01, G:0.22, T:0.38
Consensus pattern (35 bp):
AAATTGAAGTACTTTAGAAATTAGGGTTTAGAATA
Found at i:38062 original size:182 final size:182
Alignment explanation
Indices: 37732--38095 Score: 631
Period size: 182 Copynumber: 2.0 Consensus size: 182
37722 GTGTACTAAC
*
37732 TATAAATGAAACTGGCATTACGTTTTTTATATGGTAGTTTGGATTAGTCTGCACAGTCCAGCTTG
1 TATAAATGAAACTGGCATTACGTTTTTTATATGGTAGTTTGGATTAGTCTGCACAATCCAGCTTG
* *
37797 ACATGTTTGATGTATATGCCATGTAATGTCATTAATATGTTCATATCTGTTCACATTTAGAGGGT
66 ACATGTATGATGTATATGCCATGTAATGTCATTAATATGTTCATATCTGTTCACATTTAGAGGGC
*
37862 TATATCAGGGGCCTTAATACATCTTTCATCCAACACATTTTGAAGTTCTTTT
131 TATATAAGGGGCCTTAATACATCTTTCATCCAACACATTTTGAAGTTCTTTT
*
37914 TATAAATGAAACTGGCATTACGTTTTTTATATGGTAGTTTGGATTAGTCTGCACAATTCAGCTTG
1 TATAAATGAAACTGGCATTACGTTTTTTATATGGTAGTTTGGATTAGTCTGCACAATCCAGCTTG
* *
37979 ACATGTATGATGTGTATGCCATGTAATGTCATTAATATGTTCATATTTGTTCACAATTT-GAGGG
66 ACATGTATGATGTATATGCCATGTAATGTCATTAATATGTTCATATCTGTTCAC-ATTTAGAGGG
* *
38043 CTATATAAGTGGTCTTAATACATCTTTCATCCAACACATTTTGAAGTTCTTTT
130 CTATATAAGGGGCCTTAATACATCTTTCATCCAACACATTTTGAAGTTCTTTT
38096 CTGGAGGATG
Statistics
Matches: 172, Mismatches: 9, Indels: 2
0.94 0.05 0.01
Matches are distributed among these distances:
182 168 0.98
183 4 0.02
ACGTcount: A:0.27, C:0.15, G:0.17, T:0.41
Consensus pattern (182 bp):
TATAAATGAAACTGGCATTACGTTTTTTATATGGTAGTTTGGATTAGTCTGCACAATCCAGCTTG
ACATGTATGATGTATATGCCATGTAATGTCATTAATATGTTCATATCTGTTCACATTTAGAGGGC
TATATAAGGGGCCTTAATACATCTTTCATCCAACACATTTTGAAGTTCTTTT
Found at i:40939 original size:12 final size:12
Alignment explanation
Indices: 40924--40969 Score: 56
Period size: 12 Copynumber: 3.6 Consensus size: 12
40914 CGGTTTTTTT
*
40924 ACCGGATAAAAA
1 ACCGGTTAAAAA
40936 ACCGGTTTGAAAAAA
1 ACCGG-TT--AAAAA
40951 ACCGGTTAAAAA
1 ACCGGTTAAAAA
40963 ACCGGTT
1 ACCGGTT
40970 TTTATCTGAA
Statistics
Matches: 30, Mismatches: 1, Indels: 6
0.81 0.03 0.16
Matches are distributed among these distances:
12 17 0.57
13 1 0.03
14 2 0.07
15 10 0.33
ACGTcount: A:0.46, C:0.17, G:0.20, T:0.17
Consensus pattern (12 bp):
ACCGGTTAAAAA
Found at i:40951 original size:15 final size:13
Alignment explanation
Indices: 40930--40970 Score: 57
Period size: 12 Copynumber: 3.1 Consensus size: 13
40920 TTTTACCGGA
40930 TAAAAAACCGGTT
1 TAAAAAACCGGTT
40943 TGAAAAAAACCGG-T
1 T--AAAAAACCGGTT
40957 TAAAAAACCGGTT
1 TAAAAAACCGGTT
40970 T
1 T
40971 TTATCTGAAA
Statistics
Matches: 25, Mismatches: 0, Indels: 6
0.81 0.00 0.19
Matches are distributed among these distances:
12 10 0.40
13 3 0.12
14 2 0.08
15 10 0.40
ACGTcount: A:0.46, C:0.15, G:0.17, T:0.22
Consensus pattern (13 bp):
TAAAAAACCGGTT
Found at i:43292 original size:21 final size:21
Alignment explanation
Indices: 43268--43309 Score: 66
Period size: 21 Copynumber: 2.0 Consensus size: 21
43258 AGTTTATTTT
43268 TAAACTTTATTTCAATTATCG
1 TAAACTTTATTTCAATTATCG
* *
43289 TAAACTTTGTTTTAATTATCG
1 TAAACTTTATTTCAATTATCG
43310 AACTTGTCTT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 19 1.00
ACGTcount: A:0.31, C:0.12, G:0.07, T:0.50
Consensus pattern (21 bp):
TAAACTTTATTTCAATTATCG
Found at i:43972 original size:15 final size:15
Alignment explanation
Indices: 43920--43972 Score: 52
Period size: 15 Copynumber: 3.4 Consensus size: 15
43910 TTTAATAATA
43920 TTAAAATCAGTTTTT
1 TTAAAATCAGTTTTT
* * *
43935 TTATAACCGGTTTTT
1 TTAAAATCAGTTTTT
*
43950 TAAAAAAATCAGTTTTT
1 T--TAAAATCAGTTTTT
43967 TTAAAA
1 TTAAAA
43973 CCGAAACCGG
Statistics
Matches: 28, Mismatches: 8, Indels: 4
0.70 0.20 0.10
Matches are distributed among these distances:
15 17 0.61
17 11 0.39
ACGTcount: A:0.38, C:0.08, G:0.08, T:0.47
Consensus pattern (15 bp):
TTAAAATCAGTTTTT
Found at i:46073 original size:80 final size:80
Alignment explanation
Indices: 45939--46098 Score: 302
Period size: 80 Copynumber: 2.0 Consensus size: 80
45929 CATTTGAAAT
* *
45939 CGTTAAGATTTAAACATTTAATATTACTTTAAGGAGAAATTCAGAGATGGAATACTTATATTCAT
1 CGTTAAGATTCAAACATTTAATATTACTTTAAGGAGAAATTCAGAGATGAAATACTTATATTCAT
46004 TCGTACCAAGTGGCG
66 TCGTACCAAGTGGCG
46019 CGTTAAGATTCAAACATTTAATATTACTTTAAGGAGAAATTCAGAGATGAAATACTTATATTCAT
1 CGTTAAGATTCAAACATTTAATATTACTTTAAGGAGAAATTCAGAGATGAAATACTTATATTCAT
46084 TCGTACCAAGTGGCG
66 TCGTACCAAGTGGCG
46099 GAATGGTCCC
Statistics
Matches: 78, Mismatches: 2, Indels: 0
0.98 0.03 0.00
Matches are distributed among these distances:
80 78 1.00
ACGTcount: A:0.37, C:0.13, G:0.17, T:0.33
Consensus pattern (80 bp):
CGTTAAGATTCAAACATTTAATATTACTTTAAGGAGAAATTCAGAGATGAAATACTTATATTCAT
TCGTACCAAGTGGCG
Found at i:51017 original size:28 final size:27
Alignment explanation
Indices: 50951--51026 Score: 82
Period size: 28 Copynumber: 2.7 Consensus size: 27
50941 AACACTTGGA
50951 AAACAACAAAGCAATAAAGTTTCATGG
1 AAACAACAAAGCAATAAAGTTTCATGG
* *
50978 AGAAAAACAAAGCAATACA-TTTCCATAGG
1 A-AACAACAAAGCAATAAAGTTT-CAT-GG
* *
51007 AAACAATAAAGTAATAAAGT
1 AAACAACAAAGCAATAAAGT
51027 CCTATGAGTT
Statistics
Matches: 39, Mismatches: 6, Indels: 6
0.76 0.12 0.12
Matches are distributed among these distances:
27 4 0.10
28 31 0.79
29 4 0.10
ACGTcount: A:0.55, C:0.13, G:0.13, T:0.18
Consensus pattern (27 bp):
AAACAACAAAGCAATAAAGTTTCATGG
Done.