Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005173.1 Hibiscus syriacus cultivar Beakdansim tig00011672_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46676

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1790--1824
17
2.1
16
89
5
52
68
2
0
28
1.04
1793--1860
27
2.5
29
82
15
76
60
1
4
33
1.26
2286--2333
15
3.1
15
73
5
51
41
8
0
50
1.33
4027--4100
3
24.7
3
84
10
98
64
0
0
35
0.94
4722--4928
103
2.0
103
98
0
396
36
13
18
31
1.89
6695--6719
2
12.5
2
100
0
50
48
0
0
52
1.00
7009--7039
15
2.0
16
93
6
55
51
0
0
48
1.00
9664--9692
3
9.7
3
100
0
58
31
0
0
68
0.89
18318--18350
15
2.1
16
94
5
59
6
24
18
51
1.68
19096--19129
16
2.1
16
94
0
59
32
26
8
32
1.87
21019--21056
14
2.8
14
88
4
51
52
15
0
31
1.43

Tables:   1

The End!