Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005179.1 Hibiscus syriacus cultivar Beakdansim tig00011690_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67004

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17682--17808
24
5.2
24
85
1
137
40
17
10
31
1.83
17692--17801
49
2.3
49
87
1
150
40
17
10
31
1.84
22005--22053
24
2.0
24
100
0
98
36
12
16
34
1.86
29862--29905
13
3.4
13
80
0
52
25
40
27
6
1.80
40624--40679
27
2.1
27
96
0
103
35
25
14
25
1.93
42551--42592
22
2.0
21
86
13
59
64
7
0
28
1.20
43039--43073
16
2.2
16
100
0
70
45
20
11
22
1.82
47023--47796
48
16.0
48
71
10
337
31
22
13
33
1.92
47023--47704
145
4.7
145
78
4
567
31
22
13
33
1.92
47023--47841
193
4.2
188
80
7
659
30
22
13
33
1.92
47442--47893
193
2.3
193
81
4
484
32
21
12
33
1.91
54613--54652
20
2.1
20
86
9
57
77
2
12
7
1.07
55163--55197
17
2.1
17
88
0
52
42
22
5
28
1.76
55275--55833
294
1.9
296
86
3
743
28
12
26
31
1.93
55833--56545
274
2.5
280
80
7
735
27
15
27
30
1.96
57919--57976
28
2.1
28
93
0
98
24
15
12
48
1.79

Tables:   1

The End!