Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01000520.1 Hibiscus syriacus cultivar Beakdansim tig00000991_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 1956684
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
File 11 of 11
Found at i:1919603 original size:54 final size:54
Alignment explanation
Indices: 1917537--1919601 Score: 2861
Period size: 54 Copynumber: 38.2 Consensus size: 54
1917527 TATTAAGACT
* * * **
1917537 CACACATAGTGCCTATACGG-TAGTTCATCAACTCATGATGAATTCCGTGGATTTG
1 CACACTTAGTGCATGTACGGTTA-TTCATCAACTCATGATGAATTCCGT-GAAATG
* *
1917592 CACACATAGTGTC-TGTACGGTTATTCATCAACTCATGATGAATTCTGTGAAATG
1 CACACTTAGTG-CATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1917646 CACACTTAGTGCATATACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1917700 CACACTTAATGCATGTATGGTTATTCATCAACTAATGATGAATTCCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* *
1917754 CACACTTAGTTCATGTACGGTTATTCATCAACTCATGATGAATTCCATGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1917808 CACACTTAGTGCCTATACGATTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1917862 CACACTTAGTGCATGTACAGTTATTCATCAACTCATGATGAATTCCATGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * **
1917916 CACACTTAGTG-ATTGTACGGTTATTCATCAACTCATGATGAATTTCGTGGAACA
1 CACACTTAGTGCA-TGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1917970 CACACTTAGCGTATGTACGGTTATTCATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * ** * *
1918024 CACACTTAGTGCCTTTACAATTATTCATCAACTCATGATGAATTTCGTGAAATA
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1918078 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGACGAATTCCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * * *
1918132 TACACTTAATGCATTTACGGTTATTCATCAACTCATGACGAATTCTGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1918186 CACACTTAGTGTATGTACGGTTATTCATCAACTCATGATGAATTTCGGGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1918240 CACACTTAGTGCCTTTACGGTTATTCATCAACTCATGATGAATTTCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * * *
1918294 CACACTTAGTTCATGTATGGTTATTCATCAACTCATGATAAATTCCCTGAAATA
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1918348 CACACTTAGTGCATGTACGATTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1918402 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1918456 CACACTTAGTGCTTGTACGGTTATTCATCAACTCATGATGAATTTCGTGGAACG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1918510 CACCCTTAGTACTTGTACGGTTATTCATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1918564 CACACTTAGTGTC-TTTACGATTATTCATCAACTCATGATGAATTTCGTGAAATG
1 CACACTTAGTG-CATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* *
1918618 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGACGAATTCCATGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* *
1918672 CACACATAGTGTC-TGTACGGTTATTCATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTG-CATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* ** *
1918726 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGACGAATTATGTTAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * * *
1918780 TACACTTAGTGCCTGTACGGTTATTTATCAACTCATGACGAATTCCATGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
** * * *
1918834 CACACTTAGTGTTTGTACTGTTATTCATCAACTCATGATGAATTCCATAAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1918888 CACACTTAATGCCTGTACGATTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1918942 CACACTTAGTGCAAGTACGGTGATTCATCAACTCATGATAAATTCCCTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1918996 CACACTTAGTGCTTGTACGGTTATTCATCAACTCATGATGAATTTCGTGGAACG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1919050 CAAACTTAGTG-ATTGTACGGTTATTCATCAACTTAGGATGAATTCCGTGGAATG
1 CACACTTAGTGCA-TGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1919104 CACACTTAGTGCTTGTACGGTTATTCATCAACTCATGATGAATTTCGTGGAACG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * *
1919158 CACCCTTAGTACTTGTACGGTTATTCATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* *
1919212 CACACTTAGTGTC-TTTACGATTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTG-CATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* *
1919266 CACACTTAGTTCATGTACGGTTATTCATCAACTCATGATGAATTCCATGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1919320 CACACATAGTGTC-TGTACGGTTATTCATCAACTCATGATGAATTCTGTGGAATG
1 CACACTTAGTG-CATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1919374 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * * * *
1919428 CACACTTAGTTCCTTTACGGTTATTCATCAACTCATAATGAATTCTGTGAAGTG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1919482 CACACTTAGTGGC-TGTACAGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGT-GCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * * * *
1919536 CACATTTAGTGCCTGTACGGTTATTCATCAACTCACGGTGAATTTCGTGAAATG
1 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1919590 CACACTTAGTGC
1 CACACTTAGTGC
1919602 CTATTTGGTA
Statistics
Matches: 1792, Mismatches: 201, Indels: 35
0.88 0.10 0.02
Matches are distributed among these distances:
53 8 0.00
54 1734 0.97
55 47 0.03
56 3 0.00
ACGTcount: A:0.29, C:0.20, G:0.17, T:0.33
Consensus pattern (54 bp):
CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
Found at i:1921389 original size:2 final size:2
Alignment explanation
Indices: 1921382--1921406 Score: 50
Period size: 2 Copynumber: 12.5 Consensus size: 2
1921372 TCATAAAAGC
1921382 TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA T
1921407 CTTTCTGACC
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 23 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:1923602 original size:81 final size:81
Alignment explanation
Indices: 1923458--1923704 Score: 327
Period size: 81 Copynumber: 3.1 Consensus size: 81
1923448 ACTTTTCATA
* ** * * * *
1923458 TTTTACTCAGCGGTCTTTAACTGTTCATCTAATTGGA-ATAATTGACACATTTCTTCCAGTTGCA
1 TTTTACTCAGCGGTATTTAACCATTCATCTAATT-AACATAATTGACACCTTTCTGCCAATTGCA
1923522 CAGTTAGGCCATTATTC
65 CAGTTAGGCCATTATTC
* * * *
1923539 TTTTACTCAACGGTTTTTAACCATTCATCTAATTTACATAATTGACCCCTTTCTGCCAATTGCAC
1 TTTTACTCAGCGGTATTTAACCATTCATCTAATTAACATAATTGACACCTTTCTGCCAATTGCAC
*
1923604 AGTTAGACCATTATTC
66 AGTTAGGCCATTATTC
* * *
1923620 TTTTATTCAGCGGTATTTAACCATTCATCTAACTAACATAATTGACACCTTT-TGTCAATTGCAC
1 TTTTACTCAGCGGTATTTAACCATTCATCTAATTAACATAATTGACACCTTTCTGCCAATTGCAC
*
1923684 AGTTAGGTCATTATTC
66 AGTTAGGCCATTATTC
1923700 TTTTA
1 TTTTA
1923705 TTTTGGACTA
Statistics
Matches: 146, Mismatches: 19, Indels: 3
0.87 0.11 0.02
Matches are distributed among these distances:
80 31 0.21
81 115 0.79
ACGTcount: A:0.27, C:0.21, G:0.11, T:0.40
Consensus pattern (81 bp):
TTTTACTCAGCGGTATTTAACCATTCATCTAATTAACATAATTGACACCTTTCTGCCAATTGCAC
AGTTAGGCCATTATTC
Found at i:1923979 original size:54 final size:53
Alignment explanation
Indices: 1923845--1924335 Score: 680
Period size: 54 Copynumber: 9.1 Consensus size: 53
1923835 TATTAAGACT
* * **
1923845 CACACGTAGTGCCTATACGG-TAGTTCATCAACTCATGATGAATTCCGTAGATTTG
1 CACACTTAGTG-CTGTACGGTTA-TTCATCAACTCATGATGAATTCCGT-GAAATG
*
1923900 CACACATAGTGTCTGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTG-CTGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1923954 CACACTTAGTGCATGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTGC-TGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1924008 CACACTTAGTGTCTGTACGGTTATTCATCAACTAATGATGAATTCCGTGAAATG
1 CACACTTAGTG-CTGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * *
1924062 CGCACTTAGTTCATGTACGGTTATTCATCAACTCATGATGAATTCCATGAAATG
1 CACACTTAGTGC-TGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1924116 CACACTTAGTGTCTGTACGGTTATTCATCAACTCATGATGAATTTCGT-AGAATG
1 CACACTTAGTG-CTGTACGGTTATTCATCAACTCATGATGAATTCCGTGA-AATG
* *
1924170 CACACTTAGTGCCTGTACGGTTATTTATCAACTCATGATGAATTCCGTGGAATG
1 CACACTTAGTG-CTGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
* * ** * * *
1924224 CACACTTAGTTCCTTTATAGTTATTCATCAACTCAGGATGAATTTCATGAAATG
1 CACACTTAG-TGCTGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
*
1924278 CACACTTAGTGCATGTATGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1 CACACTTAGTGC-TGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
1924332 CACA
1 CACA
1924336 GTTAATGCCT
Statistics
Matches: 393, Mismatches: 34, Indels: 19
0.88 0.08 0.04
Matches are distributed among these distances:
53 5 0.01
54 341 0.87
55 45 0.11
56 2 0.01
ACGTcount: A:0.29, C:0.20, G:0.18, T:0.33
Consensus pattern (53 bp):
CACACTTAGTGCTGTACGGTTATTCATCAACTCATGATGAATTCCGTGAAATG
Found at i:1925651 original size:15 final size:16
Alignment explanation
Indices: 1925611--1925651 Score: 52
Period size: 16 Copynumber: 2.7 Consensus size: 16
1925601 TCATCCCATA
1925611 AAAT-TATAAATGATT
1 AAATATATAAATGATT
1925626 -AATATATTAAAT-ATT
1 AAATATA-TAAATGATT
1925641 AAATATATAAA
1 AAATATATAAA
1925652 AAAAATTTAA
Statistics
Matches: 23, Mismatches: 0, Indels: 6
0.79 0.00 0.21
Matches are distributed among these distances:
14 3 0.13
15 9 0.39
16 11 0.48
ACGTcount: A:0.59, C:0.00, G:0.02, T:0.39
Consensus pattern (16 bp):
AAATATATAAATGATT
Found at i:1926177 original size:19 final size:19
Alignment explanation
Indices: 1926137--1926178 Score: 50
Period size: 19 Copynumber: 2.2 Consensus size: 19
1926127 TCTAATATTT
* *
1926137 TATAAAATAATACAATACA
1 TATAAAATAATAAAATAAA
1926156 TATAAAAT-ATAAAATAAAA
1 TATAAAATAATAAAAT-AAA
1926175 TATA
1 TATA
1926179 TATCAGATTT
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
18 6 0.30
19 14 0.70
ACGTcount: A:0.67, C:0.05, G:0.00, T:0.29
Consensus pattern (19 bp):
TATAAAATAATAAAATAAA
Found at i:1933999 original size:30 final size:30
Alignment explanation
Indices: 1933938--1933999 Score: 88
Period size: 30 Copynumber: 2.1 Consensus size: 30
1933928 AAGTTTGAAA
* *
1933938 AAAATTGAAAGTTTAGGTATCAAACGGATT
1 AAAATTGAAAGTTTAGGTATCAAAAGCATT
* *
1933968 AAAATTGATAGTTTAGGTATTAAAAGCATT
1 AAAATTGAAAGTTTAGGTATCAAAAGCATT
1933998 AA
1 AA
1934000 GTTTTTAATA
Statistics
Matches: 28, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
30 28 1.00
ACGTcount: A:0.45, C:0.05, G:0.18, T:0.32
Consensus pattern (30 bp):
AAAATTGAAAGTTTAGGTATCAAAAGCATT
Found at i:1938439 original size:45 final size:44
Alignment explanation
Indices: 1938370--1938663 Score: 417
Period size: 45 Copynumber: 6.6 Consensus size: 44
1938360 GGAAAATGGT
* * *
1938370 TTATGGAATAATGGCAAGTGTATTGGTAAAATAAGCTTACGAGC
1 TTATGGAAAAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
* *
1938414 TTATGGAACAAATGGTAAGTATATTGATAAAATAAGCTTACGATC
1 TTATGGAA-AAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
* * *
1938459 TTATTGAATAATGGTAAGTATATTGGTAAAATAAGCTTATGAGC
1 TTATGGAAAAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
*
1938503 TTATGGAACAAATGGTAAATATATTGGTAAAATAAGCTTACGAGC
1 TTATGGAA-AAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
* *
1938548 TTATGGGATAAATGGTAAGTATATTGGTAAAATAAGCTTATGAGC
1 TTAT-GGAAAAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
*
1938593 TTATGGAAAAAATGGTAAATATATTGGTAAAATAAGCTTACGAGC
1 TTATGG-AAAAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
* *
1938638 TTATGGGATAAATGGTAAGTAGATTG
1 TTAT-GGAAAAATGGTAAGTATATTG
1938664 ATAAGAAATG
Statistics
Matches: 222, Mismatches: 23, Indels: 9
0.87 0.09 0.04
Matches are distributed among these distances:
44 49 0.22
45 168 0.76
46 5 0.02
ACGTcount: A:0.40, C:0.06, G:0.22, T:0.32
Consensus pattern (44 bp):
TTATGGAAAAATGGTAAGTATATTGGTAAAATAAGCTTACGAGC
Found at i:1938494 original size:89 final size:90
Alignment explanation
Indices: 1938370--1938663 Score: 475
Period size: 90 Copynumber: 3.3 Consensus size: 90
1938360 GGAAAATGGT
* * * *
1938370 TTATGGAAT-AATGGCAAGTGTATTGGTAAAATAAGCTTACGAGCTTATGGAACAAATGGTAAGT
1 TTATGGAATAAATGGTAAGTATATTGGTAAAATAAGCTTATGAGCTTATGGAACAAATGGTAAAT
* *
1938434 ATATTGATAAAATAAGCTTACGATC
66 ATATTGGTAAAATAAGCTTACGAGC
*
1938459 TTATTGAAT-AATGGTAAGTATATTGGTAAAATAAGCTTATGAGCTTATGGAACAAATGGTAAAT
1 TTATGGAATAAATGGTAAGTATATTGGTAAAATAAGCTTATGAGCTTATGGAACAAATGGTAAAT
1938523 ATATTGGTAAAATAAGCTTACGAGC
66 ATATTGGTAAAATAAGCTTACGAGC
* *
1938548 TTATGGGATAAATGGTAAGTATATTGGTAAAATAAGCTTATGAGCTTATGGAAAAAATGGTAAAT
1 TTATGGAATAAATGGTAAGTATATTGGTAAAATAAGCTTATGAGCTTATGGAACAAATGGTAAAT
1938613 ATATTGGTAAAATAAGCTTACGAGC
66 ATATTGGTAAAATAAGCTTACGAGC
* *
1938638 TTATGGGATAAATGGTAAGTAGATTG
1 TTATGGAATAAATGGTAAGTATATTG
1938664 ATAAGAAATG
Statistics
Matches: 193, Mismatches: 11, Indels: 1
0.94 0.05 0.00
Matches are distributed among these distances:
89 89 0.46
90 104 0.54
ACGTcount: A:0.40, C:0.06, G:0.22, T:0.32
Consensus pattern (90 bp):
TTATGGAATAAATGGTAAGTATATTGGTAAAATAAGCTTATGAGCTTATGGAACAAATGGTAAAT
ATATTGGTAAAATAAGCTTACGAGC
Found at i:1942975 original size:15 final size:15
Alignment explanation
Indices: 1942951--1942982 Score: 55
Period size: 15 Copynumber: 2.1 Consensus size: 15
1942941 TGGCAGATCC
*
1942951 AAATCCAGAACGGGA
1 AAATCAAGAACGGGA
1942966 AAATCAAGAACGGGA
1 AAATCAAGAACGGGA
1942981 AA
1 AA
1942983 GAAAGATTTT
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 16 1.00
ACGTcount: A:0.53, C:0.16, G:0.25, T:0.06
Consensus pattern (15 bp):
AAATCAAGAACGGGA
Found at i:1948308 original size:19 final size:20
Alignment explanation
Indices: 1948284--1948325 Score: 68
Period size: 20 Copynumber: 2.1 Consensus size: 20
1948274 TTACCAGTTG
1948284 TAAC-AAACCGTAAAAATAA
1 TAACAAAACCGTAAAAATAA
*
1948303 TAACAAAACCGTAGAAATAA
1 TAACAAAACCGTAAAAATAA
1948323 TAA
1 TAA
1948326 TGTTTCGGAA
Statistics
Matches: 21, Mismatches: 1, Indels: 1
0.91 0.04 0.04
Matches are distributed among these distances:
19 4 0.19
20 17 0.81
ACGTcount: A:0.62, C:0.14, G:0.07, T:0.17
Consensus pattern (20 bp):
TAACAAAACCGTAAAAATAA
Found at i:1951027 original size:58 final size:58
Alignment explanation
Indices: 1950933--1951047 Score: 178
Period size: 58 Copynumber: 2.0 Consensus size: 58
1950923 GGAGCACGTT
1950933 GAGAGTTTGATGTAACATCATGCTACTGACCATTTCCATTTTCTAAGAAACAAAACTA
1 GAGAGTTTGATGTAACATCATGCTACTGACCATTTCCATTTTCTAAGAAACAAAACTA
* * * *
1950991 GAGAGTTTGATGTAACATCATGCTATTG-GCATTTTCCATTTTCTAAGCAACCAAACT
1 GAGAGTTTGATGTAACATCATGCTACTGACCA-TTTCCATTTTCTAAGAAACAAAACT
1951048 CTATTTTCTT
Statistics
Matches: 52, Mismatches: 4, Indels: 2
0.90 0.07 0.03
Matches are distributed among these distances:
57 2 0.04
58 50 0.96
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (58 bp):
GAGAGTTTGATGTAACATCATGCTACTGACCATTTCCATTTTCTAAGAAACAAAACTA
Done.