Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005200.1 Hibiscus syriacus cultivar Beakdansim tig00011748_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68461

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13079--13123
18
2.4
18
81
3
54
17
11
0
71
1.14
14328--14380
13
4.1
13
72
0
52
45
15
18
20
1.85
14660--14785
47
2.8
45
85
5
164
30
22
7
39
1.82
14889--15010
40
3.0
40
93
2
201
32
25
15
26
1.95
21250--21326
26
3.0
26
84
3
93
49
9
6
35
1.60
26510--26576
26
2.6
26
92
0
107
50
10
5
32
1.61
28780--28845
19
3.5
19
87
0
78
37
12
10
39
1.77
28910--28989
30
2.7
30
92
5
128
42
13
8
35
1.76
29694--29723
12
2.5
12
100
0
60
40
13
6
40
1.71
30285--30332
21
2.4
20
86
6
62
29
12
6
52
1.63
34384--34423
21
1.9
21
89
0
62
10
25
40
25
1.86
34405--34464
23
2.7
23
77
10
72
18
23
36
21
1.95
34406--34466
20
2.9
20
82
7
59
18
24
34
22
1.96
39567--39604
19
2.0
20
84
5
51
42
21
15
21
1.89
56991--57036
20
2.3
20
80
0
56
30
23
13
32
1.93
57020--57057
20
1.9
19
94
5
67
21
26
18
34
1.96
57110--57165
22
2.5
22
100
0
112
19
10
28
41
1.85
60343--60419
28
2.9
27
70
9
70
50
6
0
42
1.28
65682--65707
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!