Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005209.1 Hibiscus syriacus cultivar Beakdansim tig00011782_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69469

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9081--9116
15
2.5
14
82
8
54
41
0
0
58
0.98
14409--14461
3
17.3
3
80
3
61
60
3
0
35
1.15
15895--16360
44
10.6
44
73
0
286
30
16
20
32
1.95
15848--16256
132
3.1
132
90
0
647
30
16
21
32
1.95
15984--16346
176
2.1
176
82
0
429
31
16
19
31
1.94
21336--21413
14
5.6
14
90
0
111
8
5
20
65
1.40
21618--21663
24
1.9
24
90
0
74
10
13
19
56
1.66
23099--23176
21
3.5
22
76
13
63
62
0
6
30
1.20
23627--23698
36
2.0
37
88
2
110
45
9
13
30
1.76
32235--32318
43
2.0
43
97
0
159
19
20
14
46
1.84
35110--35185
3
25.0
3
89
2
116
31
2
1
64
1.15
35594--35646
26
2.0
26
85
7
70
60
15
24
0
1.35
35642--35671
15
1.9
16
93
6
53
73
3
23
0
0.98
35642--35672
16
1.9
16
93
0
53
74
3
22
0
0.96
46874--47115
129
1.9
130
85
0
342
31
15
19
33
1.93
52334--52417
39
2.2
39
86
0
123
26
20
32
21
1.98
52336--52475
44
3.3
45
80
8
143
25
21
30
22
1.98
61810--61881
2
36.0
2
100
0
144
50
0
0
50
1.00
64316--64343
2
14.0
2
100
0
56
50
0
0
50
1.00
67657--67689
14
2.3
15
94
5
59
90
0
9
0
0.44

Tables:   1

The End!