Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005227.1 Hibiscus syriacus cultivar Beakdansim tig00011836_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73895

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13484--13528
18
2.6
17
86
6
63
31
15
11
42
1.82
15075--15201
62
2.0
63
82
7
152
66
0
6
26
1.21
15211--15272
21
2.8
21
79
16
63
75
3
0
20
0.94
15224--15269
24
1.9
24
86
0
65
76
2
0
21
0.90
17975--18033
7
8.3
7
76
10
57
1
20
1
76
0.96
17981--18033
20
2.5
20
84
9
70
0
20
1
77
0.87
24803--24831
13
2.3
13
94
5
51
75
3
6
13
1.13
28449--28506
30
1.9
30
86
6
82
77
0
5
17
0.94
28475--28511
12
3.2
12
88
7
58
78
0
2
18
0.87
35683--35760
32
2.4
32
85
8
113
14
11
17
56
1.67
37578--37616
13
3.0
13
100
0
78
38
7
23
30
1.83
38130--38178
15
3.3
15
82
5
55
40
8
20
30
1.81
44140--44207
17
3.9
17
92
1
109
47
13
1
38
1.52
45049--45151
39
2.6
39
73
15
113
37
16
0
45
1.48
49118--49211
46
2.0
46
89
0
143
24
21
24
29
1.99
55323--55369
21
2.2
21
88
0
67
40
21
21
17
1.91
57432--57477
23
2.0
23
100
0
92
56
17
8
17
1.65
61980--62053
27
2.7
27
91
0
112
33
18
14
32
1.92
67716--67799
40
2.1
40
95
0
150
33
4
21
40
1.74
68335--68372
11
3.5
11
85
7
51
50
18
5
26
1.68
68402--68459
30
2.0
30
86
10
84
10
12
5
72
1.26
70983--71012
15
2.0
15
93
0
51
40
3
0
56
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72276--72306
16
1.9
16
93
0
53
51
12
3
32
1.56

Tables:   1

The End!