Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005233.1 Hibiscus syriacus cultivar Beakdansim tig00011847_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64092

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--117
18
2.6
18
86
0
67
12
34
19
34
1.89
71--120
9
5.6
9
78
0
55
12
34
20
34
1.89
454--493
18
2.2
18
95
0
71
20
15
32
32
1.93
1964--2185
111
2.0
111
92
0
372
44
10
9
36
1.70
2239--2293
15
3.4
17
72
20
55
60
1
3
34
1.25
2310--2348
20
2.0
19
90
5
60
43
0
23
33
1.54
15902--15934
12
2.6
13
85
9
50
0
0
24
75
0.80
18204--18233
5
6.0
5
100
0
60
60
0
20
20
1.37
18240--18397
74
2.1
74
89
0
235
48
19
12
20
1.80
22739--22779
18
2.3
18
86
0
55
12
4
34
48
1.62
28022--28091
35
2.0
35
100
0
140
20
31
31
17
1.95
28021--28084
20
3.5
20
68
27
68
21
29
34
14
1.93
36027--36064
20
1.9
20
88
0
58
21
26
10
42
1.85
38187--38222
11
3.2
11
84
7
54
11
13
47
27
1.77
38236--38296
24
2.6
25
78
17
69
44
0
0
55
0.99
38330--38361
13
2.5
13
100
0
64
15
15
53
15
1.74
42643--42675
2
17.0
2
93
6
59
48
0
0
51
1.00
42691--42722
13
2.5
13
94
0
55
18
15
50
15
1.79
42768--42792
6
4.2
6
100
0
50
0
64
16
20
1.30
43330--43393
22
2.8
23
86
13
89
45
17
29
7
1.76
45622--45709
46
1.9
46
92
0
149
27
17
19
36
1.94
51089--51115
2
13.5
2
100
0
54
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63509--63583
37
2.0
38
82
12
93
54
1
5
38
1.31

Tables:   1

The End!