Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005239.1 Hibiscus syriacus cultivar Beakdansim tig00011861_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78322

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2494--2528
17
2.1
17
88
0
52
62
5
17
14
1.49
3361--3400
21
1.9
21
89
0
62
27
0
35
37
1.57
10278--10353
29
2.7
29
75
22
88
57
5
14
22
1.57
14414--14458
18
2.4
19
81
11
56
66
13
0
20
1.24
18653--18691
21
1.9
21
84
5
53
28
15
5
51
1.64
20562--20661
44
2.3
45
80
3
123
34
20
17
29
1.95
21123--21629
139
3.6
139
87
0
683
26
17
26
29
1.97
43025--43079
24
2.3
24
93
0
92
30
7
18
43
1.77
45451--45482
15
2.1
15
100
0
64
34
18
21
25
1.96
47034--47070
17
2.2
17
95
0
65
24
16
16
43
1.87
47707--47751
17
2.7
17
86
10
58
33
15
15
35
1.89
61622--61647
12
2.2
12
100
0
52
34
0
26
38
1.57
76228--76290
5
12.2
5
81
11
74
74
0
3
22
0.96
77974--78030
22
2.6
22
91
5
89
22
12
45
19
1.83

Tables:   1

The End!