Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005241.1 Hibiscus syriacus cultivar Beakdansim tig00011863_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56588

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10027--10084
24
2.4
23
80
8
62
48
1
0
50
1.11
10006--10096
27
3.4
27
71
22
77
51
1
0
47
1.07
10149--10217
19
3.6
19
73
21
63
47
1
1
49
1.19
21162--21812
216
3.0
216
99
0
1277
31
21
13
32
1.92
25059--25105
23
2.0
23
84
8
60
27
17
27
27
1.97
30868--31069
64
3.1
65
80
7
189
30
17
21
30
1.96
40537--40566
2
15.0
2
100
0
60
50
0
0
50
1.00
40911--40976
30
2.2
28
84
7
78
45
3
19
31
1.66
40921--40996
30
2.5
29
81
8
89
46
2
15
35
1.60
53775--53813
2
19.5
2
100
0
78
51
0
0
48
1.00
53870--53944
30
2.4
32
91
4
118
37
25
17
20
1.94
54094--54207
11
10.3
11
84
1
147
32
25
13
28
1.93
54094--54207
22
5.1
22
89
2
174
32
25
13
28
1.93
54077--54207
33
3.9
34
87
1
185
32
25
12
29
1.93

Tables:   1

The End!