Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005252.1 Hibiscus syriacus cultivar Beakdansim tig00011876_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79024

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
648--693
16
2.9
17
78
12
53
73
2
2
21
1.04
12778--12866
44
2.0
43
89
2
133
43
28
6
21
1.77
35046--35105
26
2.3
26
97
0
111
28
13
31
26
1.94
35848--35895
18
2.8
17
90
9
80
29
22
6
41
1.78
52017--52077
25
2.4
25
88
0
95
57
6
31
4
1.46
52667--52736
36
1.9
36
82
5
88
45
1
1
51
1.18
53394--53439
24
1.9
24
86
8
67
13
8
36
41
1.75
55122--55178
28
2.0
28
100
0
114
24
3
14
57
1.52
55129--55190
28
2.2
28
88
2
90
24
3
12
59
1.48
63983--64042
22
2.7
22
79
10
68
66
8
0
25
1.19
64066--64277
44
4.8
44
90
1
316
67
6
4
21
1.30
64843--64891
15
3.3
15
71
23
50
40
0
0
59
0.98
69560--69587
14
2.0
14
100
0
56
57
0
0
42
0.99
74408--74503
38
2.5
38
88
5
131
41
18
10
29
1.84
77198--77249
16
3.4
14
78
19
50
63
5
1
28
1.28
77200--77252
14
3.3
16
75
17
56
66
5
1
26
1.25
77693--77729
18
2.2
18
85
9
51
32
2
0
64
1.07

Tables:   1

The End!