Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005253.1 Hibiscus syriacus cultivar Beakdansim tig00011877_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51496

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2632--2712
18
4.6
18
90
3
110
13
24
34
27
1.93
2635--2702
35
1.9
35
90
0
109
14
23
33
27
1.94
8095--8148
28
2.0
28
92
7
94
33
5
18
42
1.73
8826--8869
2
22.0
2
100
0
88
50
0
0
50
1.00
12509--12543
11
3.0
11
91
8
52
37
2
0
60
1.12
12960--12992
11
3.0
11
95
0
57
45
27
3
24
1.68
19766--20162
66
6.0
66
92
2
647
27
17
13
41
1.87
19774--20166
30
11.8
36
69
20
232
27
16
13
41
1.87
19766--20162
130
3.0
132
90
3
631
27
17
13
41
1.87
25197--25226
15
2.0
15
100
0
60
33
0
0
66
0.92
26052--26096
23
2.0
23
82
8
56
33
0
2
64
1.06
26123--26174
26
2.0
25
85
10
70
34
3
5
55
1.42
26958--27212
130
1.9
132
92
3
435
47
5
7
40
1.53
28778--28864
36
2.4
36
96
0
165
26
17
25
31
1.97
30034--30072
14
2.8
14
88
7
53
61
5
12
20
1.50
35607--35648
21
2.0
21
90
0
66
19
14
23
42
1.87
36243--36294
2
26.0
2
100
0
104
50
0
0
50
1.00
37207--37248
20
2.1
20
86
0
57
61
23
7
7
1.47
39441--39582
32
4.4
32
72
14
98
27
12
19
40
1.87
40758--40800
22
2.0
21
86
8
61
34
13
11
39
1.82
42233--42284
23
2.3
23
93
0
86
42
21
11
25
1.86
46140--46208
23
3.0
23
83
8
95
27
26
26
20
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46224--46434
100
2.1
102
94
2
372
36
23
14
25
1.93
51264--51331
23
3.0
23
84
2
84
26
25
27
20
1.99

Tables:   1

The End!