Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005254.1 Hibiscus syriacus cultivar Beakdansim tig00011878_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74332

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3529--3804
61
4.6
61
84
9
336
26
18
20
34
1.96
3529--3804
32
9.1
31
84
9
340
26
18
20
34
1.96
3529--3804
93
3.0
91
85
6
355
26
18
20
34
1.96
4249--4295
23
2.0
23
91
0
76
25
23
14
36
1.93
8448--8497
15
3.3
16
72
13
52
52
0
0
48
1.00
8471--8513
12
3.8
12
76
17
56
48
0
0
51
1.00
8396--8510
51
2.3
51
85
5
162
53
0
0
45
1.06
8476--8517
21
2.0
21
95
0
75
45
0
0
54
0.99
8920--8964
20
2.2
21
84
4
56
48
2
2
46
1.26
10327--10366
21
1.9
21
84
0
53
50
2
0
47
1.14
15499--15543
12
3.8
12
90
0
72
46
20
2
31
1.62
15499--15542
4
11.0
4
85
0
61
47
20
2
29
1.62
16040--16064
6
4.2
6
100
0
50
20
16
64
0
1.30
16128--16171
13
3.5
13
90
6
72
18
52
15
13
1.75
16274--16325
24
2.2
24
89
0
77
26
46
13
13
1.80
16274--16325
12
4.3
12
80
0
59
26
46
13
13
1.80
17215--17271
4
14.0
4
83
1
69
42
24
7
26
1.80
17209--17265
8
7.2
8
94
2
89
40
24
8
26
1.84
17373--17442
14
5.2
13
81
5
59
25
0
24
50
1.50
17378--17428
14
3.7
14
86
2
68
25
0
23
50
1.49
17529--17566
15
2.5
15
95
0
67
42
0
7
50
1.31
17514--17555
21
2.0
21
95
0
75
42
0
7
50
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18072--18138
19
3.5
20
73
6
57
26
29
0
43
1.55
18211--18436
2
113.0
2
64
22
66
44
3
3
48
1.38
18287--18316
11
2.7
11
94
0
51
40
6
6
46
1.56
18278--18435
13
12.3
13
73
15
89
44
3
4
47
1.41
18519--18559
16
2.6
16
92
0
64
36
2
4
56
1.34
21903--21958
29
2.0
28
86
10
78
66
17
1
14
1.34
23681--23724
16
2.8
16
79
3
54
31
0
25
43
1.55
27659--27693
2
17.5
2
100
0
70
48
0
0
51
1.00
27997--28027
15
2.1
15
93
0
53
54
0
0
45
0.99
35287--35333
22
2.1
22
84
4
58
38
23
12
25
1.90
39335--39381
17
2.7
17
83
9
60
36
2
0
61
1.08
54742--55034
148
2.0
149
86
8
418
19
18
19
42
1.89
58071--58107
19
1.9
19
88
0
56
59
0
0
40
0.97
58093--58150
24
2.4
23
80
8
62
48
1
0
50
1.11
58076--58162
27
3.3
26
74
19
83
51
1
0
47
1.08
58212--58280
19
3.6
19
73
21
63
47
1
1
49
1.19
58335--58444
52
2.2
50
79
12
118
49
0
2
47
1.22
69008--69653
213
3.0
216
98
1
1248
31
22
13
32
1.92
72840--72886
23
2.0
23
84
8
60
27
17
27
27
1.97

Tables:   1

The End!