Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005259.1 Hibiscus syriacus cultivar Beakdansim tig00011896_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106576

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11274--11306
16
2.0
17
88
5
50
36
0
0
63
0.95
11346--11393
25
1.9
25
100
0
96
58
4
8
29
1.46
14606--14639
13
2.7
13
95
4
61
44
17
5
32
1.73
14577--14623
19
2.5
19
100
0
94
51
14
4
29
1.62
19579--19630
22
2.4
22
83
6
61
63
7
17
11
1.50
28309--28338
2
15.0
2
100
0
60
50
0
0
50
1.00
29932--29994
2
32.0
2
93
3
110
47
0
0
52
1.00
43084--43389
141
2.2
141
89
5
492
26
29
18
25
1.98
43541--43583
3
14.0
3
85
4
59
30
2
2
65
1.18
47914--47951
2
19.0
2
100
0
76
50
0
0
50
1.00
52469--52507
18
2.2
18
95
4
71
35
0
0
64
0.94
58283--58324
16
2.6
16
80
0
57
54
2
2
40
1.26
60515--60553
21
1.9
21
84
5
53
53
20
20
5
1.64
72402--72540
36
3.9
36
88
4
210
20
23
24
30
1.98
75605--75644
18
2.2
19
83
16
57
50
0
0
50
1.00
75607--75644
20
2.0
18
90
10
58
52
0
0
47
1.00
80473--80501
14
2.1
14
93
6
51
37
0
0
62
0.96
92323--92388
30
2.2
31
83
8
91
13
22
22
40
1.89
92593--92624
2
16.0
2
100
0
64
50
0
0
50
1.00
93408--93445
16
2.4
16
86
4
51
34
18
2
44
1.64
99181--99244
25
2.6
25
85
5
85
64
1
3
31
1.19
99181--99239
24
2.4
24
88
2
82
64
0
3
32
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105405--105445
2
21.0
2
95
5
75
51
0
0
48
1.00

Tables:   1

The End!