Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005261.1 Hibiscus syriacus cultivar Beakdansim tig00011899_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49177

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6852--6912
30
2.0
30
90
0
95
52
27
16
3
1.59
13066--13163
21
4.7
21
70
2
81
34
17
18
29
1.94
13905--13947
21
2.0
21
90
0
68
32
27
23
16
1.96
13975--14012
20
1.9
20
88
0
58
23
34
31
10
1.89
14485--14703
103
2.1
103
92
0
357
26
12
24
37
1.90
14721--14781
23
2.7
23
81
0
59
21
26
24
27
1.99
33321--33360
21
1.9
21
94
0
71
15
27
30
27
1.96
43708--43732
13
1.9
13
100
0
50
64
0
0
36
0.94
44068--44114
16
3.1
16
73
17
55
48
0
0
51
1.00
45364--45404
16
2.6
16
92
3
66
36
9
21
31
1.86

Tables:   1

The End!