Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000527.1 Hibiscus syriacus cultivar Beakdansim tig00001009_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83769

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--60
11
2.7
11
89
0
51
40
13
33
13
1.83
5923--6006
29
2.9
29
85
1
123
58
10
11
19
1.62
7319--7366
3
15.7
3
95
4
87
68
0
0
31
0.90
7877--8010
36
3.6
37
80
5
155
36
14
19
29
1.92
7877--8008
37
3.6
37
82
5
142
36
15
18
29
1.92
14317--14391
32
2.3
32
86
0
96
30
28
24
17
1.97
16025--16070
21
2.2
21
84
3
58
10
17
30
41
1.84
19786--19862
30
2.6
29
79
8
73
25
12
10
50
1.72
22590--22632
14
3.0
14
86
3
59
51
0
0
48
1.00
22640--22685
20
2.3
20
92
0
83
41
8
8
41
1.67
22640--22691
20
2.6
20
87
0
68
38
11
7
42
1.70
34312--34369
29
2.0
28
96
3
107
48
13
13
24
1.79
38999--39057
29
2.0
29
96
0
109
50
13
11
23
1.74
55247--55325
39
2.0
39
95
0
140
30
20
15
34
1.93
56352--56443
47
2.0
47
82
0
112
36
10
4
47
1.58
57031--57055
12
2.1
12
100
0
50
32
8
0
60
1.26
57621--57647
12
2.2
12
100
0
54
11
22
25
40
1.87
60688--60735
3
16.0
3
95
0
87
64
0
0
35
0.94
65179--65348
84
2.0
83
93
2
288
28
1
11
57
1.44
74371--74412
16
2.5
17
88
7
68
4
26
0
69
1.08
74378--74412
16
2.2
16
100
0
70
5
22
0
71
1.07
74458--74537
41
1.9
42
84
2
108
52
8
16
22
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83517--83577
31
2.0
31
93
0
104
29
18
29
22
1.97

Tables:   1

The End!