Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005271.1 Hibiscus syriacus cultivar Beakdansim tig00011917_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54439

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3375--3410
18
2.0
18
88
0
54
22
0
13
63
1.29
12748--12808
23
2.9
21
80
11
54
22
31
27
18
1.97
13520--13559
21
1.9
21
89
0
62
37
35
0
27
1.57
14405--14439
17
2.1
17
88
0
52
14
17
5
62
1.49
22114--22186
23
3.1
23
76
17
62
16
1
26
56
1.49
28454--28495
21
2.0
21
81
9
50
35
9
14
40
1.78
29028--29079
25
2.1
24
89
3
77
46
9
15
28
1.77
29391--29440
15
3.3
15
79
17
50
56
2
0
42
1.11
29743--29788
22
2.1
22
100
0
92
19
15
13
52
1.75
29865--30359
248
2.0
248
87
1
715
35
11
12
40
1.79
33314--33356
15
2.8
16
82
7
61
34
16
16
32
1.91
38427--38493
32
2.1
32
100
0
134
32
17
19
29
1.95

Tables:   1

The End!