Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005276.1 Hibiscus syriacus cultivar Beakdansim tig00011933_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77155

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10609--10663
28
2.0
28
86
6
78
43
3
5
47
1.44
13641--13669
10
2.9
10
100
0
58
27
10
0
62
1.28
13875--14022
63
2.3
64
81
11
171
28
0
15
55
1.45
14161--14483
161
2.0
161
95
0
574
29
16
17
37
1.91
14817--14877
16
3.8
16
77
14
54
26
1
0
72
0.94
14837--14891
10
5.0
11
82
13
60
27
0
0
72
0.85
14840--14884
16
2.8
16
83
10
56
24
0
0
75
0.80
15269--15318
25
2.0
25
96
0
91
30
16
26
28
1.96
16100--16328
127
1.8
127
83
1
307
17
18
18
44
1.86
26835--26895
21
3.2
20
68
29
53
37
4
14
42
1.68
26827--26948
35
3.4
36
84
6
158
35
4
15
44
1.68
31140--31234
31
3.1
31
75
6
93
35
21
16
26
1.94
31368--31403
17
2.0
19
89
10
58
38
11
5
44
1.63
31892--32051
64
2.5
64
84
6
200
25
20
19
35
1.96
34938--35032
31
3.1
31
80
3
111
34
21
17
26
1.95
35166--35205
21
1.9
21
85
10
55
40
10
5
45
1.60
35689--35848
64
2.5
64
84
6
191
26
20
17
35
1.94
35814--35849
19
2.0
18
89
10
56
22
27
19
30
1.98
37594--37657
21
3.4
20
66
29
59
31
4
18
45
1.70
37586--37707
35
3.4
35
84
7
165
34
3
18
44
1.66
44642--44712
29
2.4
30
88
4
99
40
4
1
53
1.29
44796--44898
29
3.7
28
82
15
124
55
1
1
40
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44806--44887
25
3.2
24
78
18
85
54
2
1
41
1.21
44835--44887
23
2.2
23
86
6
70
54
1
0
43
1.11
45001--45063
30
2.2
30
83
11
78
53
1
7
36
1.40
44988--45055
30
2.3
29
82
7
84
61
1
5
30
1.28
46437--46480
19
2.3
19
100
0
88
38
0
4
56
1.20
50054--50094
8
5.2
8
82
5
57
34
0
29
36
1.58
50165--50921
128
5.9
128
97
0
1415
23
24
19
33
1.97
51261--51321
31
2.0
31
90
3
97
42
8
9
39
1.68
51335--51433
34
3.0
33
80
5
128
38
3
3
55
1.31
51335--51432
32
3.0
32
83
4
124
37
3
3
56
1.31
51958--52040
21
4.0
21
84
4
71
22
26
31
19
1.98
53422--53475
17
3.2
16
74
10
54
62
3
0
33
1.12
53615--53693
33
2.4
32
81
12
90
59
1
0
39
1.06
53904--53999
50
1.9
50
85
4
131
19
34
30
15
1.93
65419--65463
10
4.8
10
73
15
51
62
0
2
35
1.08
76127--76160
18
1.9
18
88
5
52
17
26
29
26
1.98

Tables:   1

The End!