Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005283.1 Hibiscus syriacus cultivar Beakdansim tig00011946_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108076

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8393--8433
22
1.9
20
85
14
55
73
0
9
17
1.09
8393--8433
20
2.0
22
85
9
59
73
0
9
17
1.09
13976--14018
20
2.1
21
83
8
54
37
13
20
27
1.91
15593--15629
19
1.9
19
88
0
56
29
8
10
51
1.65
20373--20494
32
3.8
31
73
11
104
18
29
27
24
1.98
22425--22608
54
3.4
54
86
0
242
33
19
15
31
1.93
22642--22685
20
2.1
21
83
4
54
45
29
2
22
1.65
23023--23060
17
2.3
17
95
4
69
10
31
0
57
1.32
35731--35771
11
3.5
12
80
12
50
9
14
2
73
1.19
47559--47630
32
2.2
32
85
4
92
29
29
20
20
1.98
63719--63755
17
2.0
20
85
15
53
10
5
29
54
1.57
69595--69652
28
2.0
29
83
3
73
72
3
1
22
1.09
69595--69640
19
2.4
19
85
7
58
73
4
2
19
1.10
69632--69658
8
3.4
8
100
0
54
62
0
0
37
0.95
69706--69739
16
2.1
16
88
5
50
67
0
5
26
1.13
69739--69772
16
2.1
17
88
5
52
76
0
11
11
1.02
70914--70951
9
4.3
9
86
3
51
50
2
5
42
1.39
71580--71949
106
3.6
103
82
7
411
24
17
23
35
1.95
72325--72351
14
1.9
14
100
0
54
22
14
22
40
1.90
81590--81633
19
2.3
19
100
0
88
25
36
9
29
1.86
82018--82075
25
2.3
25
77
13
66
63
5
8
22
1.42
82215--82255
7
6.1
7
83
16
52
75
0
0
24
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82216--82284
20
3.2
21
80
12
70
72
1
1
24
1.01
82220--82282
19
3.3
19
80
4
72
73
1
1
23
1.01
92157--92202
18
2.6
18
96
0
83
45
0
32
21
1.52
93788--94032
130
1.9
130
90
0
391
25
13
20
40
1.88
99155--99235
40
2.1
39
92
2
135
30
23
12
33
1.92
99882--99942
32
1.9
32
86
0
86
42
22
8
26
1.81
99880--99948
15
4.5
15
82
7
75
42
24
7
26
1.80
100591--100638
21
2.3
21
88
0
69
18
29
35
16
1.93
103167--103213
23
2.0
22
84
12
58
14
44
12
27
1.82
103346--103373
13
2.2
13
100
0
56
25
14
21
39
1.91
105135--105195
28
2.2
27
83
13
79
32
1
0
65
1.02
105148--105204
17
3.1
18
77
22
57
29
0
0
70
0.88
106710--106753
21
2.2
20
83
4
52
20
15
9
54
1.68

Tables:   1

The End!