Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005284.1 Hibiscus syriacus cultivar Beakdansim tig00011956_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46432

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14304--14340
17
2.2
17
100
0
74
29
24
27
18
1.98
18004--18037
6
5.7
6
100
0
68
32
14
35
17
1.91
19873--19920
21
2.3
21
96
0
87
27
18
12
41
1.86
24524--24571
21
2.3
21
92
0
87
29
18
10
41
1.84
25983--26032
22
2.3
22
100
0
100
24
4
20
52
1.63
32509--32663
83
1.9
84
95
1
285
16
37
18
27
1.92
32509--32663
42
3.7
42
96
1
285
16
37
18
27
1.92
39925--39954
15
2.0
15
93
0
51
80
0
3
16
0.85
40150--40200
21
2.4
22
83
6
70
21
0
7
70
1.12
41944--41973
12
2.5
12
94
0
51
26
13
56
3
1.52
44543--44580
16
2.4
16
90
0
58
13
26
13
47
1.79
45093--45180
25
3.7
25
82
13
89
57
1
1
39
1.13
45121--45190
9
7.6
9
79
10
61
58
0
0
41
0.98
45139--45197
2
31.0
2
86
10
88
54
0
0
45
0.99
45434--45474
7
5.9
7
83
11
57
17
0
26
56
1.41
45430--45474
21
2.1
21
91
0
72
17
0
26
55
1.42
45464--45497
14
2.4
14
85
0
50
29
0
20
50
1.49
45436--45488
21
2.5
21
84
0
61
22
0
22
54
1.45
45576--45633
26
2.2
27
79
14
68
39
1
6
51
1.39
45593--45635
11
3.5
11
77
22
50
39
0
9
51
1.34
45602--45640
15
2.5
15
91
4
60
41
2
7
48
1.45

Tables:   1

The End!