Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005288.1 Hibiscus syriacus cultivar Beakdansim tig00011964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47186

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2457--2526
25
2.7
25
74
14
70
44
0
4
51
1.21
7211--7241
15
2.1
15
93
0
53
51
6
9
32
1.60
7869--7931
19
3.3
19
78
17
67
34
3
0
61
1.12
12282--12353
19
3.8
19
100
0
144
30
31
16
20
1.95
12321--12463
65
2.2
63
83
9
173
31
23
18
26
1.98
12435--12483
19
2.6
19
84
9
57
24
28
20
26
1.99
14565--14620
22
2.7
21
84
13
71
30
28
16
25
1.96
14567--14659
43
2.2
42
83
11
109
31
25
19
23
1.98
17316--17475
65
2.5
63
82
8
171
30
21
19
28
1.98
23284--23359
21
3.5
21
78
5
71
28
25
21
25
1.99
23284--23336
21
2.5
22
87
3
72
28
24
22
24
2.00
26117--26165
19
2.6
19
84
9
57
24
28
20
26
1.99
26050--26171
65
1.9
65
83
6
158
29
22
21
27
1.99
27961--28105
44
3.3
43
86
6
191
33
21
6
38
1.78
28102--28144
20
2.2
20
91
0
68
53
23
4
18
1.63
28204--28281
40
2.0
39
89
2
120
35
20
16
26
1.94
33012--33281
89
3.1
88
91
3
404
27
26
23
22
1.99
42757--42802
15
2.9
16
81
18
60
8
30
0
60
1.26
43005--43038
11
3.1
11
86
0
50
76
2
20
0
0.92
43001--43035
17
2.1
17
94
5
63
74
5
20
0
1.02
43062--43099
20
1.9
20
84
10
51
78
5
15
0
0.91

Tables:   1

The End!