Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005297.1 Hibiscus syriacus cultivar Beakdansim tig00011989_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60051

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
518--542
12
2.1
12
100
0
50
36
16
16
32
1.90
548--599
3
17.7
3
84
11
72
63
0
0
36
0.95
548--599
14
3.6
14
83
16
70
63
0
0
36
0.95
548--597
11
4.5
11
83
16
68
64
0
0
36
0.94
1050--1111
2
30.0
2
90
9
90
46
3
1
48
1.28
1047--1123
10
7.2
12
85
11
64
42
6
2
48
1.42
7957--8001
22
2.0
22
86
0
63
24
24
17
33
1.96
7975--8049
27
2.8
27
87
0
87
22
18
20
38
1.93
8285--8322
13
3.0
13
84
3
51
28
13
5
52
1.61
13894--13920
2
13.5
2
100
0
54
48
0
0
51
1.00
33592--33665
37
2.0
36
84
2
94
44
0
6
48
1.29
34678--34721
10
4.6
9
78
15
52
72
2
2
22
1.07
34687--34733
20
2.3
21
85
10
62
70
4
2
23
1.16
35607--35654
21
2.3
21
89
3
71
22
2
4
70
1.15
35606--35654
10
4.8
10
82
5
62
22
2
4
71
1.13
39433--39551
44
2.7
43
80
13
125
27
17
14
40
1.88
51339--51407
21
3.5
20
69
15
54
26
24
23
26
2.00
51331--51426
38
2.5
38
91
0
147
26
20
26
27
1.99
53244--53281
20
1.9
20
89
10
60
23
5
26
44
1.74
58084--58131
22
2.2
22
92
0
78
47
29
18
4
1.67
58503--58542
19
2.0
20
85
9
55
50
0
0
50
1.00

Tables:   1

The End!