Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000053.1 Hibiscus syriacus cultivar Beakdansim tig00000080_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66648

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15507--15552
24
1.9
24
95
0
83
23
8
19
47
1.77
28718--28768
20
2.5
21
93
3
86
47
0
0
52
1.00
30075--30121
17
2.6
18
83
10
60
40
0
4
55
1.19
30845--30882
18
2.1
18
100
0
76
15
39
5
39
1.70
38511--38747
117
2.0
117
94
1
413
44
16
18
20
1.86
40211--40294
27
3.1
27
82
1
89
50
14
15
20
1.78
41253--41299
23
2.0
23
100
0
94
21
4
40
34
1.73
41504--41534
2
15.5
2
100
0
62
51
0
0
48
1.00
41554--41596
20
2.2
20
86
0
59
39
16
16
27
1.90
45248--45539
162
1.8
160
89
3
444
50
8
2
39
1.45
50651--50736
12
7.2
12
83
0
100
65
0
34
0
0.93
50657--50736
24
3.3
24
89
0
115
65
0
35
0
0.93
50651--50737
36
2.4
36
90
0
138
65
0
34
0
0.93
59631--59711
34
2.4
34
100
0
162
29
17
14
38
1.90

Tables:   1

The End!