Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005303.1 Hibiscus syriacus cultivar Beakdansim tig00012005_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71287

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8712--8748
20
1.9
19
89
10
58
18
21
10
48
1.78
26117--26191
35
2.1
36
87
2
107
45
21
0
33
1.52
28682--28859
50
3.6
50
98
0
338
23
16
17
41
1.90
35113--35226
60
1.9
59
83
3
140
35
14
11
37
1.83
40404--40457
27
2.0
27
100
0
108
29
11
18
40
1.85
45976--46064
40
2.2
40
91
0
142
47
25
11
15
1.79
48282--48324
21
2.0
21
100
0
86
34
4
18
41
1.71
50253--50305
20
2.6
21
77
16
58
30
15
1
52
1.53
50513--50593
2
40.5
2
97
0
153
49
0
0
50
1.00
50764--50837
29
2.4
31
80
13
80
44
0
5
50
1.25
56119--56228
58
1.9
58
98
0
211
27
15
31
25
1.96
63124--63191
23
3.0
23
82
0
82
19
27
25
27
1.98
66493--66558
23
2.9
23
81
0
69
24
27
19
28
1.99
67614--67684
18
3.9
18
96
0
124
19
21
32
26
1.97
70861--70903
22
2.0
22
90
0
68
51
0
0
48
1.00

Tables:   1

The End!