Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005315.1 Hibiscus syriacus cultivar Beakdansim tig00012032_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85792

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9479--9512
16
2.2
16
89
5
52
29
5
0
64
1.17
11160--11222
20
3.1
20
90
2
99
14
26
41
17
1.88
11160--11222
21
3.0
21
88
4
101
14
26
41
17
1.88
17937--17979
19
2.3
19
95
0
77
27
2
16
53
1.55
25976--26103
60
2.1
60
82
2
150
34
16
18
30
1.93
26118--26188
30
2.4
31
80
17
87
53
2
1
42
1.24
38009--38079
36
2.0
36
97
0
133
45
14
15
25
1.84
41992--42040
24
2.0
24
92
0
80
30
12
10
46
1.74
42375--42488
60
1.9
61
90
1
185
25
19
26
28
1.98
47343--47404
18
3.4
18
93
0
79
32
27
24
16
1.96
47335--47404
36
1.9
36
91
0
113
30
28
22
18
1.98
52750--52854
48
2.2
48
96
0
192
45
18
5
30
1.72
52880--52933
20
2.7
20
76
0
54
70
1
3
24
1.13
62285--62411
63
2.0
63
100
0
254
37
20
6
35
1.78
63737--63817
23
3.7
21
77
4
63
24
29
23
22
1.99
63747--63796
23
2.2
23
85
0
64
20
34
22
24
1.97
65217--65300
41
2.0
41
100
0
168
36
11
14
36
1.83
76644--76843
56
3.6
56
84
1
240
40
14
17
28
1.88
77078--77349
139
2.0
135
83
7
347
29
10
22
37
1.87
78413--78477
31
2.1
31
91
0
103
41
13
21
23
1.89

Tables:   1

The End!