Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005317.1 Hibiscus syriacus cultivar Beakdansim tig00012037_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37759

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1766--1811
24
1.9
24
81
0
56
45
19
13
21
1.84
11935--12060
59
2.1
59
83
1
153
41
17
13
27
1.87
15196--15312
20
5.9
18
76
16
108
32
26
17
23
1.97
15196--15327
40
3.3
40
85
6
144
34
27
16
21
1.95
15237--15327
40
2.2
41
92
5
150
36
24
17
21
1.95
15199--15312
60
1.9
60
83
7
151
31
26
18
23
1.97
16156--16187
6
5.3
6
92
0
55
0
12
53
34
1.39
16256--16323
21
3.3
21
72
12
68
20
17
26
35
1.95
16271--16345
20
3.7
20
74
10
80
25
21
22
30
1.99
16257--16350
41
2.3
41
90
0
152
23
18
25
32
1.97
20409--20465
18
3.2
18
68
9
53
8
12
24
54
1.65
22151--22178
4
7.0
4
100
0
56
25
0
75
0
0.81
26113--26175
13
4.5
15
73
23
57
50
3
0
46
1.17
32196--32287
43
2.1
43
86
4
123
53
4
14
28
1.59
36010--36051
6
7.0
6
82
17
52
0
28
0
71
0.86
36002--36043
17
2.5
17
96
3
77
0
23
0
76
0.79

Tables:   1

The End!