Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005324.1 Hibiscus syriacus cultivar Beakdansim tig00012049_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103570

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
913--975
21
3.0
21
84
6
83
28
23
23
23
2.00
6901--6963
33
2.0
32
93
6
110
44
31
9
14
1.77
7679--7703
13
1.9
13
100
0
50
76
0
0
24
0.80
9639--9727
30
3.0
30
80
8
85
34
12
13
39
1.82
10410--10434
2
12.5
2
100
0
50
48
0
0
52
1.00
21354--21406
25
2.1
25
89
0
79
39
5
7
47
1.56
22285--22309
11
2.3
11
100
0
50
8
20
44
28
1.79
24746--24875
60
2.2
57
77
11
138
35
8
13
42
1.75
27784--27831
2
24.0
2
95
0
87
47
0
0
52
1.00
39615--39666
23
2.2
24
80
19
65
59
11
13
15
1.61
40943--40981
20
2.0
20
89
0
60
17
0
7
74
1.05
41911--41946
18
2.0
18
100
0
54
33
5
27
33
1.80
42796--42829
2
17.0
2
100
0
68
50
0
0
50
1.00
42919--42965
14
3.5
15
78
18
50
51
2
0
46
1.13
48019--48052
2
17.5
2
93
6
61
50
0
0
50
1.00
54532--54576
11
4.1
11
81
18
58
15
20
53
11
1.72
57190--57214
2
12.5
2
100
0
50
52
0
48
0
1.00
57273--57875
299
2.0
300
96
0
1118
36
20
16
26
1.93
73073--73117
13
3.5
13
84
0
63
28
20
17
33
1.95
80625--80653
14
2.0
15
93
6
51
24
0
6
68
1.13
80987--81026
15
2.7
15
96
3
73
40
12
5
42
1.64

Tables:   1

The End!