Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005329.1 Hibiscus syriacus cultivar Beakdansim tig00012066_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44541

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4406--4462
25
2.3
24
91
8
96
49
7
7
36
1.57
4584--4730
76
1.9
75
88
1
222
38
21
10
29
1.86
7578--7617
16
2.3
18
87
8
57
55
2
2
40
1.27
7590--7644
28
2.0
28
82
7
67
50
1
1
45
1.22
7901--7992
2
49.5
2
79
14
81
57
1
0
41
1.06
10087--10116
15
2.0
15
93
0
51
50
3
0
46
1.18
11300--11661
180
2.0
180
86
2
512
24
15
19
40
1.90
15137--15182
22
2.0
24
88
12
71
41
0
0
58
0.98
22570--22643
28
2.6
29
91
2
123
40
6
17
35
1.76
22572--22643
29
2.5
28
90
2
117
40
6
16
36
1.76
22928--22967
20
1.9
20
85
10
53
45
12
0
42
1.42
22825--23194
186
2.0
186
93
1
634
37
17
5
38
1.75
24395--24424
2
15.0
2
92
0
51
50
3
0
46
1.18
29027--29080
20
2.7
20
88
0
72
31
33
16
18
1.93
29084--29143
23
2.6
24
94
5
99
25
16
20
38
1.93
35812--35844
2
16.5
2
100
0
66
48
0
0
51
1.00
43557--43678
40
3.0
40
86
0
163
31
2
18
47
1.61

Tables:   1

The End!