Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005331.1 Hibiscus syriacus cultivar Beakdansim tig00012075_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67832

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5276--5314
21
1.9
20
89
5
60
48
0
2
48
1.15
19126--19167
4
10.5
4
100
0
84
76
0
0
23
0.79
20341--20402
31
2.0
31
96
3
117
22
27
16
33
1.95
21956--22002
18
2.6
19
83
10
62
2
40
0
57
1.11
28626--28653
14
2.0
14
100
0
56
35
28
7
28
1.84
39128--39268
64
2.2
63
82
7
169
34
17
22
25
1.96
40045--40114
30
2.3
30
85
0
86
22
20
24
32
1.97
44081--44115
14
2.5
13
86
13
52
40
0
0
60
0.97
60135--60183
23
2.1
23
92
0
80
55
10
10
24
1.64
62645--62787
59
2.4
60
88
1
216
35
17
13
32
1.89
64518--64559
22
1.9
22
85
9
59
40
0
0
59
0.97
65067--65217
20
7.6
20
90
0
230
45
23
11
19
1.83
65259--65305
19
2.5
19
100
0
94
55
12
10
21
1.67
65398--65446
21
2.4
21
89
3
73
22
38
12
26
1.89
66702--66739
20
1.9
20
94
0
67
36
23
21
18
1.95

Tables:   1

The End!