Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005332.1 Hibiscus syriacus cultivar Beakdansim tig00012076_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63962

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1753--1779
11
2.5
11
100
0
54
44
14
11
29
1.80
3592--3629
18
2.1
17
90
9
58
50
5
0
44
1.24
3855--3905
23
2.2
23
92
0
84
21
21
21
35
1.96
5986--6035
25
2.0
25
84
7
66
52
0
4
44
1.20
6541--6845
9
30.8
9
65
21
64
15
7
1
75
1.12
6526--6642
43
2.6
44
75
9
103
17
5
1
76
1.06
6546--6846
33
9.1
32
69
20
108
15
7
1
74
1.14
6538--6716
77
2.3
76
77
11
170
16
5
2
74
1.12
6708--6785
31
2.6
32
78
11
85
14
8
0
76
1.00
6708--6785
28
2.6
31
75
18
85
14
8
0
76
1.00
7224--7276
21
2.5
21
87
0
79
20
24
18
35
1.95
7266--7378
20
5.7
20
97
0
208
39
21
19
19
1.92
7369--7411
20
2.2
20
91
0
68
32
27
18
20
1.96
8073--8116
19
2.3
19
96
0
79
38
25
6
29
1.81
10744--10832
20
4.5
19
85
13
117
33
24
21
20
1.97
10754--10830
40
1.9
41
91
2
129
35
22
20
22
1.96
11023--11059
14
2.6
14
86
0
56
48
21
0
29
1.50
12442--12547
40
2.6
39
75
11
97
22
18
37
20
1.94
13010--13198
20
9.6
20
83
9
201
36
22
20
20
1.95
13034--13176
76
1.9
74
88
2
214
37
22
20
19
1.94
13014--13214
96
2.1
96
94
1
352
36
21
21
19
1.95
13241--13286
20
2.3
20
84
0
65
19
21
23
34
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13211--13373
87
1.9
87
90
0
263
16
19
20
43
1.88
13261--13353
33
2.8
33
71
3
78
15
19
20
45
1.86
13328--13379
20
2.6
20
93
0
95
19
19
23
38
1.93
15250--15319
20
3.5
20
86
1
97
51
22
14
11
1.74
15868--15920
20
2.7
20
96
0
97
18
20
22
37
1.94
15917--15962
21
2.2
21
92
0
74
39
17
26
17
1.91
27155--27180
12
2.2
12
100
0
52
76
0
0
23
0.78
29463--29493
2
15.5
2
100
0
62
51
0
0
48
1.00
30221--30266
20
2.3
20
96
0
83
28
34
19
17
1.94
41444--41476
16
2.1
16
94
0
57
66
0
0
33
0.92
41694--42083
196
2.0
196
85
5
529
35
16
15
32
1.91
42046--42121
39
1.9
39
89
0
116
35
15
22
26
1.94
45286--45586
68
4.4
68
88
1
426
31
13
24
30
1.94
45589--45947
81
4.4
81
87
0
470
36
10
23
30
1.87
61172--61196
9
2.8
9
100
0
50
12
0
8
80
0.92

Tables:   1

The End!