Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005335.1 Hibiscus syriacus cultivar Beakdansim tig00012081_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57569

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13311--13361
22
2.3
20
78
18
57
66
7
25
0
1.18
13305--13375
24
3.1
22
76
9
63
71
5
19
2
1.18
15329--15500
65
2.8
64
81
9
187
38
19
13
27
1.90
15463--15722
124
2.1
124
85
2
344
35
23
14
26
1.94
15820--15906
34
2.6
34
94
0
147
36
28
14
19
1.92
16018--16347
83
3.9
83
82
5
380
33
19
19
27
1.96
17533--17591
27
2.3
27
82
8
70
23
6
11
57
1.58
28266--28327
21
3.2
20
67
21
51
43
22
11
22
1.85
30024--30101
36
2.1
35
80
17
86
44
0
2
52
1.14
31204--31321
39
3.0
39
97
0
227
38
5
19
35
1.76
33149--33198
23
2.3
22
89
6
75
32
28
14
26
1.94
33858--33903
18
2.4
20
85
7
60
34
26
8
30
1.86
39989--40018
14
2.1
14
100
0
60
36
16
6
40
1.75
40072--40104
12
2.6
13
85
9
50
39
6
12
42
1.67
40341--40376
15
2.3
16
90
4
56
75
16
0
8
1.04
41845--41882
12
2.9
13
88
7
51
44
7
10
36
1.68
46550--46657
56
1.9
57
86
5
157
30
20
18
30
1.96
50468--50519
19
2.6
21
90
6
81
46
5
13
34
1.67
51400--51459
30
2.0
31
86
3
86
53
10
8
28
1.63
54637--54681
19
2.2
21
88
7
67
44
6
13
35
1.70
55477--55535
30
2.0
31
86
6
86
54
8
8
28
1.60

Tables:   1

The End!